| Protein: | RM07_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 287 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RM07_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
292.0 | [0..23] | [277..92] |
|
|
289.0 | [0..23] | [277..96] |
|
|
285.0 | [0..23] | [282..35] |
|
|
285.0 | [0..23] | [277..86] |
|
|
278.0 | [0..23] | [282..37] |
|
|
278.0 | [0..23] | [277..100] |
|
|
270.0 | [0..97] | [279..3] |
|
|
270.0 | [0..97] | [280..3] |
|
|
269.0 | [0..93] | [278..5] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MLGIRKNIRI SVNFLQRRTI TVKQKLGKNR PLPGWDPNSE YFRPGPTMLN RLQEHLHDTI 60
61 LPDVLAASYR HDIDTALSTD EHTQKDRLPR WIGDNP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.408 | a.29.2 | Bromodomain |
| View | Download | 0.429 | a.22.1 | Histone-fold |
| View | Download | 0.425 | b.82.3 | cAMP-binding domain-like |
| View | Download | 0.577 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.383 | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [97-287] |
1 11 21 31 41 51
| | | | | |
1 YYKNRPPQKM RGNKPLLPVK ESVNPKNLPS ISKVVVSTMH KEALVDKTQL LSTMMAFRSI 60
61 TGLQPEIVYA RKDVSPWKLR SGVPVGVKVT LTGESMYTFL SILSELVLPQ LHDFKGLSPT 120
121 SGDQTGNISF GLPSEVMPLF PQIEAVYEMY PHSLPGFNVN ITTNSKDTRL ARFFVSSLIP 180
181 FTDGNKEGYV G
|
| Detection Method: | |
| Confidence: | 72.0 |
| Match: | 1iq4A |
| Description: | Ribosomal protein L5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 10.0077098174023 | bayes_pls_golite062009 |
| structural molecule activity | 9.43117206427219 | bayes_pls_golite062009 |
| binding | 1.22985833191636 | bayes_pls_golite062009 |
| protein binding | 0.551360246680731 | bayes_pls_golite062009 |
