| Protein: | MRE11_ORYSI |
| Organism: | Oryza sativa Indica Group |
| Length: | 705 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRE11_ORYSI.
| Description | E-value | Query Range |
Subject Range |
|
|
479.0 | [0..1] | [705..1] |
|
Region A: Residues: [1-397] |
1 11 21 31 41 51
| | | | | |
1 MGDESNTLRV LVATDCHLGY MEKDEIRRFD SFEAFEEICS LAEQNKVDFV LLGGDLFHEN 60
61 KPSRSTLVKT IEILRRYCLN DQPVKFQVVS DQTINFPNRF GQVNYEDPNF NVGLPVFTIH 120
121 GNHDDPAGVD NLSAIDILSA CNLVNYFGKM DLGGSGVGEI AVYPVLVKKG TTFVALYGLG 180
181 NIRDERLNRM FQTPHAVQWM RPETQDGMSV SDWFNILVLH QNRIKTNPKS AINEHFLPRF 240
241 LDFIVWGHEH ECLIDPQEVP GMGFHITQPG SSVATSLIDG EAKPKHVLLL EIKGNQYRPT 300
301 KIPLRSVRPF HYAEVVLKDE VDVDPNDQAS VLEHLDKIVR NLIKKSSQPT ASRPETKLPL 360
361 IRIKVDYSGF STINPQRFGQ KYVGKVANPQ DILIFSK
|
| Detection Method: |  |
| Confidence: | 42.09691 |
| Match: | 1ii7A |
| Description: | Mre11 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.868467185939998 | bayes_pls_golite062009 |
| hydrolase activity | 0.63676719824861 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.46273977460329 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.30428003695269 | bayes_pls_golite062009 |
| phosphatase activity | 0.12690085186887 | bayes_pls_golite062009 |
|
Region A: Residues: [398-564] |
1 11 21 31 41 51
| | | | | |
1 SAKKRQTTGV GNIDDSEKLR PEELNQQTIE ALVAENNLKM EILPVDDLDI ALHDFVSKDD 60
61 KMAFYACLQR NLEETRTKLN SEADKFKIEE EDIIVKVGEC MQERVKERSL RSKEDSRFTS 120
121 SSQNLDTGGR SVTAQSNLNS FSDDEDTREM LLGARTTNAG RKASGFT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [565-705] |
1 11 21 31 41 51
| | | | | |
1 RPSKDATDVA KTGTSRRGRG RGTASMKQTT LNFSQSRSSA AIRSEEVQSS SDEENETNEA 60
61 NEVVESSEPE ESPQQTGRKR AAPRGGRGRG RGATAKRGRK ADISSIQSML MSKDDDDDDE 120
121 DDRPKKPPPR VTRNYGAVRR R
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
