YRC Public Data Repository - Protein Structure Prediction

Protein:	ZPR1_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	459 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZPR1_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|3510464, gi\|1... - gi\|3510464\|gb\|AAC33515.1\| zinc finger protein [Schizosaccharomyces pombe], pir\|\|T43538 zinc finger p...	664.0	[0..1]	[459..1]
orf19.10810, orf... - ZPR1 CGDID:CAL0004036 Assembly 19, Contig19-10173 (22377, 20848) CDS, reverse complemented, translat... gi\|46439879, gi\|... - gi\|68475550\|ref\|XP_718123.1\| likely ZPR1 zinc finger protein [Candida albicans SC5314], gi\|68475013\|...	599.0	[0..1]	[450..19]
ZPR1 - Essential protein with two zinc fingers, present in the nucleus of growing cells but relocates to th... ZPR1_YEAST - Zinc finger protein ZPR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZPR1 PE=1 SV=1 gi\|151943488 - gi\|151943488\|gb\|EDN61799.1\| Zinc finger protein [Saccharomyces cerevisiae YJM789] gi\|190406779 - gi\|190406779\|gb\|EDV10046.1\| zinc-finger protein ZPR1 [Saccharomyces cerevisiae RM11-1a] gi\|207344977 - gi\|207344977\|gb\|EDZ71944.1\| YGR211Wp-like protein [Saccharomyces cerevisiae AWRI1631]	590.0	[0..4]	[450..3]
gi\|45185551, gi\|... - gi\|45185551\|ref\|NP_983267.1\| ACL137Cp [Ashbya gossypii ATCC 10895], gi\|44981269\|gb\|AAS51091.1\| ACL13... gi\|44981269 - gi\|44981269\|gb\|AAS51091.1\| ACL137Cp [Ashbya gossypii ATCC 10895]	589.0	[0..3]	[449..4]
gi\|145651788, gi... - gi\|42568162\|ref\|NP_198550.3\| zinc finger (ZPR1-type) family protein [Arabidopsis thaliana], gi\|14565...	585.0	[0..4]	[451..2]
gi\|50291649, gi\|... - gi\|50291649\|ref\|XP_448257.1\| unnamed protein product [Candida glabrata], gi\|49527569\|emb\|CAG61218.1\|... gi\|49527569 - gi\|49527569\|emb\|CAG61218.1\| unnamed protein product [Candida glabrata]	571.0	[0..5]	[450..2]
gi\|46109176, gi\|... - gi\|46109176\|ref\|XP_381646.1\| hypothetical protein FG01470.1 [Gibberella zeae PH-1], gi\|42544740\|gb\|E...	565.0	[0..1]	[455..6]

Back

Predicted Domain #1

Region A:
Residues: [1-459]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEKKEELF TSIGNAAQNV STAEDREGNG VQEVESLCME CGKNGTTKLL LTVIPYFREV  60
   61 VLMSFECPHC GFKNAQVQHA ETIQPEGSKI TFHVEDKEDL NRTVVKSQEA IVSIPEIQLE 120
  121 IPGRLGQLTT IEGILSNVVD DLSKEQESRK ESAPQLYDQI NAFIEKVNSL RSGSVPFTIT 180
  181 VDDITGNSWI EMKPGRDGDR WSQVSYKRTL EQNTKLGLVD TDQPEDVKTQ TNNASNTLKH 240
  241 DATAVEVDPN EVHTFHATCP SCSHQCDTHM KLLDIPHFKE VIIMSTVCDR CGYRSNEVKT 300
  301 GGEIPPKGRK ITLKVMDAED LSRDILKSET ASLKIPELGL DLFPGTLGGR FTTIEGLLAQ 360
  361 VYDELYGRVF SQETDSMTPE QVANWQQFLC NLTAAREGAT QFTLILDDPL SQSYLQNYYA 420
  421 PDPDPNMTIE EYERSFQVNE ELGLNDMKTE NYEKDGGKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	148.0
Match:	2qkdA
Description:	No description for 2qkdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits