YRC Public Data Repository - Protein Structure Prediction

Protein:	DUR33_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	661 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUR33_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|42550008, gi\|... - gi\|46114538\|ref\|XP_383287.1\| hypothetical protein FG03111.1 [Gibberella zeae PH-1], gi\|42550008\|gb\|E...	310.0	[0..2]	[654..12]
gi\|86196181, gi\|... - gi\|86196181\|gb\|EAQ70819.1\| hypothetical protein MGCH7_ch7g226 [Magnaporthe grisea 70-15], gi\|3995613...	305.0	[0..2]	[656..5]
SPBC23G7.13c - urea transporter DUR31_SCHPO - Probable urea active transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dur3-1 ...	300.0	[0..1]	[660..1]
gi\|388367 - gi\|388367\|gb\|AAA34582.1\| Dur3	299.0	[0..4]	[631..6]
gi\|85090209 - gi\|85090209\|ref\|XP_958308.1\| urea active transporter [Neurospora crassa OR74A] gi\|32418358, gi\|... - gi\|32418358\|ref\|XP_329657.1\| hypothetical protein [Neurospora crassa], gi\|28919657\|gb\|EAA29072.1\| ur...	295.0	[0..2]	[654..13]
gi\|44980930 - gi\|44980930\|gb\|AAS50813.1\| ABR043Wp [Ashbya gossypii ATCC 10895] gi\|45185272, gi\|... - gi\|45185272\|ref\|NP_982989.1\| ABR043Wp [Ashbya gossypii ATCC 10895], gi\|44980930\|gb\|AAS50813.1\| ABR04...	286.0	[0..4]	[633..6]
gi\|50291859, gi\|... - gi\|50291859\|ref\|XP_448362.1\| unnamed protein product [Candida glabrata], gi\|49527674\|emb\|CAG61323.1\|... gi\|49527674 - gi\|49527674\|emb\|CAG61323.1\| unnamed protein product [Candida glabrata]	285.0	[0..4]	[631..6]
gi\|49642113 - gi\|49642113\|emb\|CAH01831.1\| KLLA0C17468p [Kluyveromyces lactis] gi\|50306037, gi\|... - gi\|50306037\|ref\|XP_452980.1\| unnamed protein product [Kluyveromyces lactis], gi\|49642113\|emb\|CAH0183...	281.0	[0..3]	[631..5]
orf19.8403, orf1... - orf19.781 CGDID:CAL0001976 Assembly 19, Contig19-10073 (68688, 66511) CDS, reverse complemented, tra... gi\|238879070 - gi\|238879070\|gb\|EEQ42708.1\| urea active transporter [Candida albicans WO-1] gi\|46435134, gi\|... - gi\|68485050\|ref\|XP_713591.1\| potential urea active transport protein [Candida albicans SC5314], gi\|6...	281.0	[0..5]	[631..7]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTETVLNQGY GYGIVIGLGF AFAIVMILVT YVLKRYVGEV QDSEHFTTAS RSVKTGLISS  60
   61 AVVSSWTWPG TLLTSAGMAY EYGVCGSMWY SFAFTVQITF FTVIALQVKR VAPGAHTIVE 120
  121 IVKARFGQAS HAVFLFYALG TNIIVSAMLL LGGSQAISAI T

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [162-245]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMHVVAAGFL LPLGVWLYTV SGGLKSTFLS DWTHTVIVYI VILITLFVAY TSSVHIGSID  60
   61 KMYDLLTEVS KTNPSTGYKG SYLT

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [246-446]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTNRDAVFVG WNIVIGGFAT VFCDPSYGQK AIAAKPISAM KGYFAGGLAW LIVPWAMGSA  60
   61 AALSCLALTN NPVSVTYPDP VSSKQVSEGM PLLYGMTALM GKNGAAAGVL ILFMASTSAT 120
  121 SAELVAFSSV MTYDVYRNYF RPNASGKELV RVTHVFVTIF AVCMGALAVL FNYIGITISW 180
  181 IITFIGIALG PAVFGITLTL F

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [447-661]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WKKMNKYGMI IGCPMGSITG VVCWVGSCYK FSNGVVNKTT LNTPYANAVG NFTGLFSGLI  60
   61 YIVLISYFFP NKSDDLNNLN EKFVLGDDAT AEEIVDAETE KKQLDRSLRI GIFVSWIIFF 120
  121 ILVIIVPLPM YGSKYIFSKL FFRGWIIVII IWTLIAALYI TFYPLYESRD TIVYLCKLAI 180
  181 GKAKAPEPMN YVDAVEVEIE SLSDDDKEKK ANDFL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits