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View Structure Prediction Details

Protein: gi|115457694, gi...
Organism: Oryza sativa Japonica Group
Length: 1134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|115457694, gi....

Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKMSRLEL DAGVSLWAGL QPDILGIVLH FLPCLADRAR VRSFSSLSDK GDFMPVRCVP  60
   61 VPKEVAADDL RCVGSFHGWL VGVTPNKDRS DEYNRDADGD CFLVNVFSRK VIRLPQLCHM 120
  121 RYNFPAYSSK TLRIVNGSGE VHFGVNDIYT MSLCNVALSA SPESSKYIVA ASSDHKGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [179-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVPALWQPGM ISWQVCSGVE IDGPRDLSFY QGKLYMLMRH RTRLFTCELE EDDRGFMVSR  60
   61 IELSLTELPR NHPYQEGGAI SCNMVVWRGE LLLIIRHYNG DYRKRQLHKV EVFALDV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [296-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTNPYGLTEI HSLNGDCIFV GLGGCKSFPA GLHHGVEGDH IYFVPDDWRP YDTFVYSMRD  60
   61 AGVWKPTAGA LPEFDLRKEN PCNTDQSEQN KNTDQGGL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.552842
Match: PF03478.10
Description: No description for PF03478.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [394-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAELRRSISC LTKAGVDTVP QFLPQPRRLA RLRRRPYRIG SHLRFASQVR SDIMTSSYVS  60
   61 LED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [457-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEEYKMMGTV VFSSEEEGYK FYLDYAKGKG FSVRKNNLKR KDGEIIWRQF VCSCEGYREL  60
   61 KHFERTERIR EPRALTRCGC LAKLEIERNE EKGVWFVKEF DNQHTHEL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.221849
Match: PF03101.7
Description: No description for PF03101.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [565-663]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANPDHVAFLG VHRVMSDSKK AQAVELRMSG LRPFQVMEVM ENNHDELDEV GFVMKDLYNF  60
   61 FTRYDMKNIK GHDAEDVLKY LTRKQEEDAE FFFKYTTDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [664-800]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGRLRNVFWA DAESRLDYAA FGGVVIFDST YRVNKYNLPF IPFIGVNHHR STTIFGCGIL  60
   61 SNESVNSYCW LLETFLEAMR QVHPKSLITD GDLAMAKAIS KVMPGAYHRL CTWHIEENMS 120
  121 RHLRKPKLDE LRKLIYE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.481486
Match: PF10551.1
Description: No description for PF10551.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [801-962]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMDEEEFERR WADFKENGGT GNGQWIALMY RLREKWAAAY TDGKYLLGMR SNQRSESLNS  60
   61 KLHTLLKRNM SLMCLVKHVK LCIQGLRKKE AQLDAKSTNS VPFCRIDADP LEKDAARIYT 120
  121 AVVFKKVRAQ IRLIAGLEVI SGTNQDGSSL YVVGLKDDNE VW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [963-1134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEVRVSFKGQ ALEGVECHCR KMECEDIPCS HIFVVVKFLG FDTIPRCCVV DRWTMGAKAA  60
   61 FRSDRNADPN VWSEHMVRYR SLRNLGSDAF FEAARNPEQT EKAMDFLKGI LDKGSSSDEN 120
  121 IVAGDFGPMP THFSSSNQPL EKRVLDPEEI RAKGAPSKRR RPFRETLHTN NQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle