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View Structure Prediction Details

Protein: NDUC2_MOUSE
Organism: Mus musculus
Length: 120 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUC2_MOUSE.

Description E-value Query
Range
Subject
Range
gi|57164133, gi|... - gi|57164133|ref|NP_001009290.1| NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 [Rattus nor...
207.0 [0..1] [120..1]
gi|83004247, gi|... - gi|83004247|ref|XP_915124.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1, subcomplex unk...
202.0 [0..1] [120..1]
gi|49065322, gi|... - gi|7513177|pir||T08728 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) 14.1K chain - human, gi|4906532...
gi|117644194 - gi|117644194|emb|CAL37591.1| hypothetical protein [synthetic construct]
198.0 [0..2] [120..1]
NDUC2_PANTR - NADH dehydrogenase [ubiquinone] 1 subunit C2 OS=Pan troglodytes GN=NDUFC2 PE=3 SV=1
197.0 [0..2] [120..1]
NDUC2_BOVIN - NADH dehydrogenase [ubiquinone] 1 subunit C2 OS=Bos taurus GN=NDUFC2 PE=1 SV=1
197.0 [0..1] [120..1]
NDUC2_MACFA - NADH dehydrogenase [ubiquinone] 1 subunit C2 OS=Macaca fascicularis GN=NDUFC2 PE=3 SV=1
193.0 [0..2] [120..1]
gi|57102342 - gi|57102342|ref|XP_533999.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1, subcomplex unk...
190.0 [0..1] [120..1]
NDUC2_PONAB - NADH dehydrogenase [ubiquinone] 1 subunit C2 OS=Pongo abelii GN=NDUFC2 PE=3 SV=1
NDUC2_PONPY - NADH dehydrogenase [ubiquinone] 1 subunit C2 OS=Pongo pygmaeus GN=NDUFC2 PE=3 SV=1
168.0 [0..2] [119..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNGRPGHEP LKFLPDEARS LPPPKLNDPR LVYMGLLGYC TGLMDNMLRM RPVMRAGLHR  60
   61 QLLFVTSFVF AGYFYLKRQN YLYAVKDHDM FGYIKLHPED FPEKEKKTYA EILEPFHPVR 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 91.886057
Match: PF06374.2
Description: No description for PF06374.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.522 0.201 mitochondrial electron transport, NADH to ubiquinone a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.536 0.034 mitochondrial electron transport, NADH to ubiquinone a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.668 0.026 mitochondrial electron transport, NADH to ubiquinone a.7.8 GAT domain
View Download 0.535 0.021 mitochondrial inner membrane f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.529 0.017 mitochondrial electron transport, NADH to ubiquinone a.24.4 Hemerythrin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle