| Protein: | USE1_MOUSE |
| Organism: | Mus musculus |
| Length: | 270 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for USE1_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..1] | [270..1] |
|
|
324.0 | [0..1] | [270..1] |
|
|
308.0 | [0..12] | [270..1] |
|
|
305.0 | [0..1] | [270..1] |
|
|
302.0 | [0..12] | [270..1] |
|
|
298.0 | [0..12] | [270..1] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MAQAEGAYHR PLATSRLELN LVRLLCRCES MAAEKREPDE WRLEKYVGAL EDMLQALKVQ 60
61 ASKPASEVIS EYSRKVDFLK GMLQAEKLTS SSEKALANQF LAPGRVPTTA KERVPATKTV 120
121 HLQSRARYTS EMRSELLGME PSGECEVDMR KRA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.926 | 0.235 | lysosomal transport | a.118.1 | ARM repeat |
| View | Download | 0.931 | 0.054 | lysosomal transport | a.47.2 | t-snare proteins |
| View | Download | 0.943 | 0.037 | lysosomal transport | a.24.4 | Hemerythrin |
| View | Download | 0.885 | 0.017 | lysosomal transport | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.827 | N/A | N/A | a.24.4 | Hemerythrin |
|
Region A: Residues: [154-270] |
1 11 21 31 41 51
| | | | | |
1 AKGSRPADER QSASELDLVL QRHQGLQEKL AEEMLGLARS LKTNTLAAQS VIKKDNQTLS 60
61 HSLKMADQNL EKLKLESERL EQHAQKSVNW LLWAMLIVVC FVFISMILFI RIMPRLK
|
| Detection Method: | |
| Confidence: | 2.17 |
| Match: | 1l4aD |
| Description: | Synaptosomal-assosiated protein SNAP-25 |
Matching Structure (courtesy of the PDB): |
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