YRC Public Data Repository - Protein Structure Prediction

Protein:	TIFA_MOUSE
Organism:	Mus musculus
Length:	184 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIFA_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|33086586 - gi\|33086586\|gb\|AAP92605.1\| Ab2-389 [Rattus norvegicus]	320.0	[0..1]	[178..241]
gi\|74147494 - gi\|74147494\|dbj\|BAE38653.1\| unnamed protein product [Mus musculus]	315.0	[0..1]	[184..1]
gi\|74002374 - gi\|74002374\|ref\|XP_545028.2\| PREDICTED: similar to TRAF-interacting protein with a forkhead-associat...	297.0	[0..1]	[184..24]
gi\|109075389 - gi\|109075389\|ref\|XP_001092116.1\| PREDICTED: similar to TRAF-interacting protein with a forkhead-asso...	296.0	[0..1]	[183..1]
gi\|55623106 - gi\|55623106\|ref\|XP_526660.1\| PREDICTED: TRAF-interacting protein with a forkhead-associated domain [...	296.0	[0..1]	[183..1]
TIFA - TRAF-interacting protein with forkhead-associated domain gi\|123999074, gi... - gi\|208968803\|dbj\|BAG74240.1\| TRAF-interacting protein with a forkhead-associated domain [synthetic c...	287.0	[0..1]	[183..1]
gi\|45356820 - gi\|45356820\|gb\|AAS58449.1\| TRAF2 binding protein [Ctenopharyngodon idella]	252.0	[0..1]	[165..1]

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Predicted Domain #1

Region A:
Residues: [1-184]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFEDADTE ETVTCLQMTI YHPGQQSGIF KSIRFCSKEK FPSIEVVKFG RNSNMCQYTF  60
   61 QDKQVSRIQF VLQPFKQFNS SVLSFEIKNM SKKTSLMVDN QELGYLNKMD LPYKCMLRFG 120
  121 EYQFLLQKED GESVESFETQ FIMSSRPLLQ ENNWPTQNPI PEDGMYSSYF THRSSPSEMD 180
  181 ENEL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.77
Match:	2jpeA
Description:	No description for 2jpeA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits