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View Structure Prediction Details

Protein: IL12A_MOUSE
Organism: Mus musculus
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IL12A_MOUSE.

Description E-value Query
Range
Subject
Range
gi|18656517 - gi|18656517|gb|AAL77817.1|AF401989_1 single chain interleukin-12 [synthetic construct]
355.0 [0..23] [215..345]
gi|85397861, gi|... - gi|85397861|gb|AAI04985.1| Interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymp...
354.0 [0..1] [215..35]
IL12A_LAMGL - Interleukin-12 subunit alpha OS=Lama glama GN=IL12A PE=2 SV=1
350.0 [0..1] [215..1]
gi|84794456 - gi|84794456|dbj|BAE75803.1| interleukin-12p35 [Camelus bactrianus]
347.0 [0..1] [215..1]
IL12A_HORSE - Interleukin-12 subunit alpha OS=Equus caballus GN=IL12A PE=2 SV=1
346.0 [0..1] [215..1]
gi|113461959, gi... - gi|644802|gb|AAA86707.1| interleukin-12 beta p35 subunit, gi|113461959|ref|NP_001038199.1| interleuk...
346.0 [0..1] [215..35]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCQSRYLLFL ATLALLNHLS LARVIPVSGP ARCLSQSRNL LKTTDDMVKT AREKLKHYSC  60
   61 TAEDIDHEDI TRDQTSTLKT CLPLELHKNE SCLATRETSS TTRGSCLPPQ KTSLMMTLCL 120
  121 GSIYEDLKMY QTEFQAINAA LQNHNHQQII LDKGMLVAID ELMQSLNHNG ETLRQKPPVG 180
  181 EADPYRVKMK LCILLHAFST RVVTINRVMG YLSSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.69897
Match: 1f45B
Description: Heterodimeric interleukin-12 alpha chain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
interleukin-12 binding 6.97623072079116 bayes_pls_golite062009
cytokine receptor binding 6.47223189691244 bayes_pls_golite062009
interleukin-27 binding 6.42738636095917 bayes_pls_golite062009
interleukin-12 beta subunit binding 5.72528664872472 bayes_pls_golite062009
receptor binding 5.3304255990112 bayes_pls_golite062009
cytokine activity 5.22856893358132 bayes_pls_golite062009
growth factor activity 4.92105782010612 bayes_pls_golite062009
interleukin-12 receptor binding 4.74969286958651 bayes_pls_golite062009
protein binding 3.26483713001551 bayes_pls_golite062009
binding 2.48265117231403 bayes_pls_golite062009
prolactin receptor binding 2.45721634350294 bayes_pls_golite062009
interleukin-6 receptor binding 2.37535614986843 bayes_pls_golite062009
hormone activity 2.25587306265428 bayes_pls_golite062009
growth hormone activity 1.87531277315347 bayes_pls_golite062009
ciliary neurotrophic factor receptor binding 1.79326213321183 bayes_pls_golite062009
interleukin-2 receptor binding 1.24568403220915 bayes_pls_golite062009
interleukin-10 receptor binding 1.21666375770079 bayes_pls_golite062009
macrophage colony stimulating factor receptor binding 1.01092937856314 bayes_pls_golite062009
interferon-alpha/beta receptor binding 0.93290045827216 bayes_pls_golite062009
erythropoietin receptor binding 0.77580300541347 bayes_pls_golite062009
transcription regulator activity 0.486790888007408 bayes_pls_golite062009
catalytic activity 0.246169290135575 bayes_pls_golite062009

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