Protein: | SMS_MOUSE |
Organism: | Mus musculus |
Length: | 116 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMS_MOUSE.
Description | E-value | Query Range |
Subject Range |
|
166.0 | [0..1] | [116..1] |
|
165.0 | [0..1] | [116..1] |
|
165.0 | [0..1] | [116..1] |
|
164.0 | [0..1] | [116..1] |
|
164.0 | [0..1] | [116..1] |
|
152.0 | [0..1] | [116..1] |
|
146.0 | [0..1] | [116..1] |
|
145.0 | [0..1] | [116..1] |
|
144.0 | [0..1] | [116..1] |
Region A: Residues: [1-116] |
1 11 21 31 41 51 | | | | | | 1 MLSCRLQCAL AALCIVLALG GVTGAPSDPR LRQFLQKSLA AATGKQELAK YFLAELLSEP 60 61 NQTENDALEP EDLPQAAEQD EMRLELQRSA NSNPAMAPRE RKAGCKNFFW KTFTSC |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.562 | a.11.2 | Second domain of FERM |
View | Download | 0.463 | a.28.3 | Retrovirus capsid protein C-terminal domain |
View | Download | 0.435 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.357 | a.64.1 | Saposin |
View | Download | 0.341 | a.50.1 | Anaphylotoxins (complement system) |