YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|118418489, gi...
Organism:	Bacillus thuringiensis str. Al Hakam
Length:	122 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|118418489, gi....

Description	E-value	Query Range	Subject Range
gi\|229093118, gi... - gi\|229093118\|ref\|ZP_04224240.1\| hypothetical protein bcere0021_38560 [Bacillus cereus Rock3-42], gi\|... gi\|228729586, gi... - gi\|229031702\|ref\|ZP_04187695.1\| hypothetical protein bcere0028_37550 [Bacillus cereus AH1271], gi\|22... gi\|222097511, gi... - gi\|222097511\|ref\|YP_002531568.1\| RibT reductase protein (riboflavin biosynthesis) [Bacillus cereus Q... gi\|228585344, gi... - gi\|229198184\|ref\|ZP_04324893.1\| hypothetical protein bcere0001_37140 [Bacillus cereus m1293], gi\|228... gi\|229174735, gi... - gi\|229174735\|ref\|ZP_04302259.1\| hypothetical protein bcere0006_38220 [Bacillus cereus MM3], gi\|22860... gi\|206977431, gi... - gi\|206977431\|ref\|ZP_03238327.1\| ribT protein [Bacillus cereus H3081.97], gi\|206744422\|gb\|EDZ55833.1\|... gi\|217961552, gi... - gi\|217961552\|ref\|YP_002340122.1\| ribT protein [Bacillus cereus AH187], gi\|217067453\|gb\|ACJ81703.1\| r... gi\|51974900, gi\|... - gi\|52141431\|ref\|YP_085397.1\| RibT reductase protein (riboflavin biosynthesis) [Bacillus cereus E33L]... gi\|47557223, gi\|... - gi\|47565943\|ref\|ZP_00236982.1\| RibT protein [Bacillus cereus G9241], gi\|47557223\|gb\|EAL15552.1\| RibT... gi\|42783175, gi\|... - gi\|42783175\|ref\|NP_980422.1\| ribT protein [Bacillus cereus ATCC 10987], gi\|42739103\|gb\|AAS43030.1\| r...	196.0	[0..1]	[122..1]
gi\|206971313, gi... - gi\|206971313\|ref\|ZP_03232264.1\| ribT protein [Bacillus cereus AH1134], gi\|206734085\|gb\|EDZ51256.1\| r... gi\|29897704, gi\|... - gi\|30022147\|ref\|NP_833778.1\| RibT protein [Bacillus cereus ATCC 14579], gi\|29897704\|gb\|AAP10979.1\| R... gi\|228967094, gi... - gi\|228967094\|ref\|ZP_04128130.1\| hypothetical protein bthur0004_38980 [Bacillus thuringiensis serovar... gi\|228960327, gi... - gi\|228960327\|ref\|ZP_04121980.1\| hypothetical protein bthur0005_37950 [Bacillus thuringiensis serovar... gi\|228805277, gi... - gi\|228954345\|ref\|ZP_04116371.1\| hypothetical protein bthur0006_37160 [Bacillus thuringiensis serovar... gi\|228857012, gi... - gi\|228902571\|ref\|ZP_04066722.1\| hypothetical protein bthur0014_37470 [Bacillus thuringiensis IBL 422... gi\|229111534, gi... - gi\|229111534\|ref\|ZP_04241085.1\| hypothetical protein bcere0018_37790 [Bacillus cereus Rock1-15], gi\|... gi\|229081318, gi... - gi\|229081318\|ref\|ZP_04213821.1\| hypothetical protein bcere0023_39520 [Bacillus cereus Rock4-2], gi\|2... gi\|229071565, gi... - gi\|229071565\|ref\|ZP_04204783.1\| hypothetical protein bcere0025_37340 [Bacillus cereus F65185], gi\|22... gi\|229047753, gi... - gi\|229047753\|ref\|ZP_04193333.1\| hypothetical protein bcere0027_37300 [Bacillus cereus AH676], gi\|228... gi\|228603087, gi... - gi\|229180340\|ref\|ZP_04307683.1\| hypothetical protein bcere0005_36850 [Bacillus cereus 172560W], gi\|2... gi\|229152263, gi... - gi\|229152263\|ref\|ZP_04280456.1\| hypothetical protein bcere0011_38020 [Bacillus cereus m1550], gi\|228... gi\|229146635, gi... - gi\|229146635\|ref\|ZP_04275002.1\| hypothetical protein bcere0012_37760 [Bacillus cereus BDRD-ST24], gi... gi\|228653946, gi... - gi\|229129341\|ref\|ZP_04258312.1\| hypothetical protein bcere0015_37840 [Bacillus cereus BDRD-Cer4], gi... gi\|218158846, gi... - gi\|218230889\|ref\|YP_002368864.1\| ribT protein [Bacillus cereus B4264], gi\|218158846\|gb\|ACK58838.1\| r... gi\|218899221, gi... - gi\|218899221\|ref\|YP_002447632.1\| ribT protein [Bacillus cereus G9842], gi\|218540630\|gb\|ACK93024.1\| r... gi\|229192273, gi... - gi\|229192273\|ref\|ZP_04319238.1\| hypothetical protein bcere0002_39260 [Bacillus cereus ATCC 10876], g...	194.0	[0..1]	[122..1]
gi\|229013271, gi... - gi\|229013271\|ref\|ZP_04170412.1\| hypothetical protein bmyco0001_36850 [Bacillus mycoides DSM 2048], g... gi\|229025516, gi... - gi\|229025516\|ref\|ZP_04181926.1\| hypothetical protein bcere0029_38140 [Bacillus cereus AH1272], gi\|22... gi\|228742022, gi... - gi\|229019271\|ref\|ZP_04176098.1\| hypothetical protein bcere0030_37780 [Bacillus cereus AH1273], gi\|22... gi\|228648545, gi... - gi\|229134870\|ref\|ZP_04263677.1\| hypothetical protein bcere0014_37780 [Bacillus cereus BDRD-ST196], g... gi\|163941802, gi... - gi\|89206722\|ref\|ZP_01185276.1\| GCN5-related N-acetyltransferase [Bacillus weihenstephanensis KBAB4],... gi\|229061734, gi... - gi\|229061734\|ref\|ZP_04199068.1\| hypothetical protein bcere0026_38130 [Bacillus cereus AH603], gi\|228... gi\|228614653, gi... - gi\|229168805\|ref\|ZP_04296524.1\| hypothetical protein bcere0007_37590 [Bacillus cereus AH621], gi\|228...	186.0	[0..1]	[122..1]
gi\|89149096, gi\|... - gi\|89202904\|ref\|ZP_01181609.1\| GCN5-related N-acetyltransferase [Bacillus cereus subsp. cytotoxis NV...	183.0	[0..1]	[122..1]
RIBT_BACSU - Protein RibT OS=Bacillus subtilis (strain 168) GN=ribT PE=3 SV=1 gi\|221319487 - gi\|221319487\|ref\|ZP_03600781.1\| reductase [Bacillus subtilis subsp. subtilis str. JH642] gi\|221314565 - gi\|221314565\|ref\|ZP_03596370.1\| reductase [Bacillus subtilis subsp. subtilis str. NCIB 3610] RIBT_BACSU - Protein RibT OS=Bacillus subtilis GN=ribT PE=4 SV=1 gi\|221323763 - gi\|221323763\|ref\|ZP_03605057.1\| reductase [Bacillus subtilis subsp. subtilis str. SMY]	179.0	[0..1]	[115..1]
gi\|56380670, gi\|... - gi\|56420828\|ref\|YP_148146.1\| hypothetical protein GK2293 [Geobacillus kaustophilus HTA426], gi\|56380...	178.0	[0..1]	[113..1]
YLYA_BACMT - Uncharacterized N-acetyltransferase in lysA 3'region OS=Bacillus methanolicus PE=3 SV=1	177.0	[0..1]	[114..1]
gi\|4538520 - gi\|4538520\|emb\|CAB39370.1\| ribTD protein [Bacillus amyloliquefaciens]	174.0	[0..1]	[114..1]
gi\|23099285, gi\|... - gi\|23099285\|ref\|NP_692751.1\| reductase [Oceanobacillus iheyensis HTE831], gi\|22777514\|dbj\|BAC13786.1...	163.0	[0..1]	[115..1]
gi\|10174175, gi\|... - gi\|15614121\|ref\|NP_242424.1\| reductase (riboflavin biosynthesis) [Bacillus halodurans C-125], gi\|101... gi\|25355214 - pir\|\|F83844 reductase (riboflavin biosynthesis) ribT [imported] - Bacillus halodurans (strain C-125)	162.0	[0..1]	[114..1]

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Predicted Domain #1

Region A:
Residues: [1-122]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIRFKKSYE KIAMGLLSFM PTEKDVKTLQ LTMKDYEAKD DWQLYLWKQN EDFVGIMGIV  60
   61 KKENQVLEIQ HLSVNPSHRH MGIGTKMVQE LKSKFLEFTI CGNEQTASFC KKCTGLEQNI 120
  121 HS

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	3.68
Match:	2atrA
Description:	Acetyltransferase, GNAT family protein SP0256 from Streptococcus pneumoniae TIGR4
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits