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View Structure Prediction Details

Protein: gi|124384712, gi...
Organism: Burkholderia mallei NCTC 10229
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124384712, gi....

Description E-value Query
Range
Subject
Range
gi|33601553, gi|... - gi|33601553|ref|NP_889113.1| flagellar biosynthetic protein [Bordetella bronchiseptica RB50], gi|335...
196.0 [0..1] [259..1]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSVTYAQLN GWLTAFLWPF VRMLALVAIA PVTGHRSTPV RVKIGLAGFM ALVVAPTLPP  60
   61 MPVATVFSAQ GVWIIVNQFL IGAALGFTMQ IVFAAIEAAG DIIGLSMGLG FATFFDPHSS 120
  121 GATPVMGRFL NAVAILAFLA FDGHLQVFAA LVDSFRLVPV SANL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRAAGWQTLV AFGAAIFEMG LLLALPVVAA LLIANLALGI LNRAAPQIGI FQVGFPVTML  60
   61 VGLLLVQLMA PNLIPFVGRL FDTGVDFVGR VAAGMH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle