Protein: | gi|123982586, gi... |
Organism: | synthetic construct |
Length: | 353 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123982586, gi....
Description | E-value | Query Range |
Subject Range |
|
3.0E-99 | [1..353] | [1..353] |
|
5.0E-99 | [1..353] | [1..353] |
|
1.0E-98 | [1..353] | [1..353] |
|
5.0E-98 | [1..353] | [1..353] |
|
1.0E-97 | [1..353] | [1..352] |
|
8.0E-97 | [1..353] | [1..354] |
|
3.0E-91 | [31..353] | [5..327] |
|
1.0E-84 | [1..347] | [1..339] |
Region A: Residues: [1-160] |
1 11 21 31 41 51 | | | | | | 1 MAATKRKRRG GFAVQAKKPK RNEIDAEPPA KRHATAEEVE EEERDRIPGP VCKGKWKNKE 60 61 RILIFSSRGI NFRTRHLMQD LRMLMPHSKA DTKMDRKDKL FVINEVCEMK NCNKCIYFEA 120 121 KKKQDLYMWL SNSPHGPSAK FLVQNIHTLA ELKMTGNCLK |
Detection Method: | ![]() |
Confidence: | 11.522879 |
Match: | 2cxhA |
Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
aminoacyl-tRNA ligase activity | 3.87211694771248 | bayes_pls_golite062009 |
ligase activity, forming carbon-oxygen bonds | 3.87184649959884 | bayes_pls_golite062009 |
ligase activity, forming aminoacyl-tRNA and related compounds | 3.87184649959884 | bayes_pls_golite062009 |
ligase activity | 2.64230127203047 | bayes_pls_golite062009 |
proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
binding | 1.78917266819015 | bayes_pls_golite062009 |
catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
protein binding | 0.665778090365515 | bayes_pls_golite062009 |
Region A: Residues: [161-258] |
1 11 21 31 41 51 | | | | | | 1 GSRPLLSFDP AFDELPHYAL LKELLIQIFS TPRYHPKSQP FVDHVFTFTI LDNRIWFRNF 60 61 QIIEEDAALV EIGPRFVLNL IKIFQGSFGG PTLYENPH |
Detection Method: | ![]() |
Confidence: | 1.52 |
Match: | 2cxhA |
Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [259-353] |
1 11 21 31 41 51 | | | | | | 1 YQSPNMHRRV IRSITAAKYR EKQQVKDVQK LRKKEPKTLL PHDPTADVFV TPAEEKPIEI 60 61 QWVKPEPKVD LKARKKRIYK RQRKMKQRMD SGKTK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.