| Protein: | gi|125524663 |
| Organism: | Oryza sativa Indica Group |
| Length: | 344 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125524663.
| Description | E-value | Query Range |
Subject Range |
|
|
171.0 | [0..10] | [342..5] |
|
Region A: Residues: [1-344] |
1 11 21 31 41 51
| | | | | |
1 MNPGRPAPAS FRDRTNEFRA AVESAARYAS SSAAAAPSSS SGGGVGGPLD VSRGAASAHS 60
61 EFNRRASKIG LGIHQTSQKL ARLAKLAKRT SVFDDPTVEI QELTAVIKKD ITALNSAVVD 120
121 LQVLCNSQNE SGNLSKDTTN HSTTVVDNLK NRLMSATKEF KEVLTMRTEN LKVHENRRQM 180
181 FSSSAANNAS NPFVRQRPLV TRDGPESSVP PAPWASDSAT TPLFQRKKTN GDHGASSSSS 240
241 QPFMQQQLVQ QDSYMQSRAE ALQNVESTIH ELSNIFTQLA TMVSQQGELA IRIDENMDDT 300
301 LANVEGAQGQ LLKYLNSISS NRWLMMKIFF VLMVFLMIFI FFVA
|
| Detection Method: |  |
| Confidence: | 24.221849 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| protein binding | 2.01524199895183 | bayes_pls_golite062009 |
| binding | 1.88170908543488 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| protein transporter activity | 1.09007120264887 | bayes_pls_golite062009 |
| SNARE binding | 0.71459772253941 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
