| Protein: | gi|114650545 |
| Organism: | Pan troglodytes |
| Length: | 252 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114650545.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-91 | [1..252] | [1..252] |
|
|
6.0E-87 | [1..252] | [1..253] |
|
|
4.0E-67 | [53..252] | [12..211] |
|
|
9.0E-65 | [45..252] | [27..236] |
|
|
2.0E-64 | [45..252] | [46..255] |
|
|
7.0E-64 | [45..252] | [46..255] |
|
|
2.0E-63 | [63..252] | [58..247] |
|
|
2.0E-63 | [63..252] | [58..247] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MVKPVPLFRR TDFKLLLCNH KDLFFLRVSK LLDCFSPKSM WFLWNIFSKG THMLQCLCGK 60
61 SLKK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.402 | 0.055 | growth factor activity | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.389 | 0.036 | growth factor activity | a.3.1 | Cytochrome c |
| View | Download | 0.401 | 0.017 | growth factor activity | a.138.1 | Multiheme cytochromes |
| View | Download | 0.409 | 0.008 | growth factor activity | a.65.1 | Annexin |
| View | Download | 0.416 | 0.003 | growth factor activity | a.56.1 | CO dehydrogenase ISP C-domain like |
|
Region A: Residues: [65-252] |
1 11 21 31 41 51
| | | | | |
1 NKNPTDPQLK GIVTRLYCRQ GYYLQMHPDG ALDGTKDDST NSTLFNLIPV GLRVVAIQGV 60
61 KTGLYIAMNG EGYLYPSELF TPECKFKESV FENYYVIYSS MLYRQQESGR AWFLGLNKEG 120
121 QAMKGNRVKK TKPAAHFLPK PLEVAMYREP SLHDVGETVP KPGVTPSKST SASAIMNGGK 180
181 PVNKSKTT
|
| Detection Method: | |
| Confidence: | 47.522879 |
| Match: | 1q1uA |
| Description: | Crystal structure of human FHF1b (FGF12b) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.90110516688922 | bayes_pls_golite062009 |
| receptor binding | 2.16557070623757 | bayes_pls_golite062009 |
| protein binding | 1.94397222237906 | bayes_pls_golite062009 |
| growth factor activity | 1.45668559810417 | bayes_pls_golite062009 |
| cytokine activity | 0.491912278395019 | bayes_pls_golite062009 |
| fibroblast growth factor receptor binding | 0.379391310291065 | bayes_pls_golite062009 |
