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View Structure Prediction Details

Protein: gi|123994967, gi...
Organism: synthetic construct
Length: 232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123994967, gi....

Description E-value Query
Range		 Subject
Range
gi|109089524 - gi|109089524|ref|XP_001105457.1| PREDICTED: similar to RTP801 [Macaca mulatta]
 1.0E-96 [4..232] [430..659]
gi|114631154 - gi|114631154|ref|XP_507843.2| PREDICTED: similar to DNA-damage-inducible transcript 4 [Pan troglodyt...
 2.0E-93 [4..232] [270..498]
gi|73952868 - gi|73952868|ref|XP_546156.2| PREDICTED: similar to RTP801 isoform 1 [Canis familiaris]
 3.0E-92 [1..232] [1..230]
DDIT4_BOVIN - DNA damage-inducible transcript 4 protein OS=Bos taurus GN=DDIT4 PE=2 SV=1
 6.0E-91 [1..232] [1..229]
DDIT4_MOUSE - DNA damage-inducible transcript 4 protein OS=Mus musculus GN=Ddit4 PE=1 SV=1
IPI:IPI00328567.... - Hypothetical protein
gi|149038775 - gi|149038775|gb|EDL93064.1| DNA-damage-inducible transcript 4 [Rattus norvegicus]
 3.0E-89 [1..232] [1..229]
DDIT4_RAT - DNA damage-inducible transcript 4 protein OS=Rattus norvegicus GN=Ddit4 PE=1 SV=1
 6.0E-89 [1..232] [1..229]
gi|12052860 - gi|12052860|emb|CAB66603.1| hypothetical protein [Homo sapiens]
gi|117646740 - gi|117646740|emb|CAL37485.1| hypothetical protein [synthetic construct]
 1.0E-88 [1..232] [1..232]
DDIT4_XENLA - DNA damage-inducible transcript 4 protein OS=Xenopus laevis GN=ddit4 PE=2 SV=1
 2.0E-80 [1..232] [1..219]
DDIT4_XENTR - DNA damage-inducible transcript 4 protein OS=Xenopus tropicalis GN=ddit4 PE=2 SV=1
 3.0E-78 [1..232] [1..219]

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Predicted Domain #1
Region A:
Residues: [1-88] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLWDRFSS SSTSSSPSSL PRTPTPDRPP RSAWGSATRE EGFDRSTSLE SSDCESLDSS  60
   61 NSGFGPEEDT AYLDGVSLPD FELLSDPE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-232] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEHLCANLMQ LLQESLAQAR LGSRRPARLL MPSQLVSQVG KELLRLAYSE PCGLRGALLD  60
   61 VCVEQGKSCH SVGQLALDPS LVPTFQLTLV LRLDSRLWPK IQGLFSSANS PFLPGFSQSL 120
  121 TLSTGFRVIK KKLYSSEQLL IEEC

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 72.823909
Match: PF07809.2
Description: No description for PF07809.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle