YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|114673349
Organism: Pan troglodytes
Length: 160 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114673349.

Description E-value Query
Range
Subject
Range
gi|109506723, gi... - gi|109507479|ref|XP_001065314.1| PREDICTED: similar to complexin 4 [Rattus norvegicus], gi|109506723...
8.0E-59 [1..160] [111..270]
gi|26336316 - gi|26336316|dbj|BAC31843.1| unnamed protein product [Mus musculus]
2.0E-46 [1..160] [1..160]
gi|109122306 - gi|109122306|ref|XP_001087561.1| PREDICTED: similar to complexin 4 [Macaca mulatta]
2.0E-45 [1..160] [1..160]
gi|73945932 - gi|73945932|ref|XP_852635.1| PREDICTED: similar to complexin 4 [Canis familiaris]
4.0E-44 [1..160] [1..160]
gi|18676540 - gi|18676540|dbj|BAB84922.1| FLJ00167 protein [Homo sapiens]
5.0E-42 [1..160] [24..181]
CPLX3_BOVIN - Complexin-3 OS=Bos taurus GN=CPLX3 PE=2 SV=1
2.0E-39 [1..160] [1..158]

Back

Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLMKSMIS NQVKNLGFGG GSEENKEEGG ASDPAAAQGM TREEYEEYQK QMIEEKMERD  60
   61 AAFTQKKAER ACLRVHLREK YRLPKSEMDE NQIQMAGDDV DLPEDLRKMV DEDQEEEEDK 120
  121 DSILGQIQNL QNMDLDTIKE KAQATFTEIK QTAEQKCSVM 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle