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View Structure Prediction Details

Protein: gi|116310243, gi...
Organism: Oryza sativa Indica Group
Length: 266 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116310243, gi....

Description E-value Query
Range
Subject
Range
gi|20148671, gi|... - gi|30695160|ref|NP_850727.1| phagocytosis and cell motility protein ELMO1-related [Arabidopsis thali...
339.0 [0..1] [266..1]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRNAGSFVA MRRLSGGSSC HDPSPNTYAE VVAGSTAWIG RGFSCVCAQR RDSDQRISFD  60
   61 LSPAQECCLQ RLQNRIEVPY D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSNGEHQEAL KTLWHVSFPG TELLGLVSDQ WKEMGWQGKD PSTDFRGGGF ISLENLLYFA  60
   61 KNYTKSFQEL LCKQNGDRAL WEYPFAVAGV NITFMLIQML DLQAAKPRSL IGSVFLNLLL 120
  121 ENDRAFDILY CITFKLMDHK WLEMHANYMD FNAVIKSTRR QLERELLLED IQRIEDMPSY 180
  181 RFLDR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 89.455932
Match: PF04727.4
Description: No description for PF04727.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle