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View Structure Prediction Details

Protein: gi|62653738, gi|...
Organism: Rattus norvegicus
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62653738, gi|....

Description E-value Query
Range
Subject
Range
gi|109506723, gi... - gi|109507479|ref|XP_001065314.1| PREDICTED: similar to complexin 4 [Rattus norvegicus], gi|109506723...
193.0 [0..1] [158..111]
gi|18676540 - gi|18676540|dbj|BAB84922.1| FLJ00167 protein [Homo sapiens]
164.0 [0..1] [158..24]
CPLX3_BOVIN - Complexin-3 OS=Bos taurus GN=CPLX3 PE=2 SV=1
158.0 [0..1] [158..1]
gi|74000994 - gi|74000994|ref|XP_854351.1| PREDICTED: similar to complexin III [Canis familiaris]
158.0 [0..1] [158..1]
gi|26336316 - gi|26336316|dbj|BAC31843.1| unnamed protein product [Mus musculus]
153.0 [0..1] [158..1]
gi|109122306 - gi|109122306|ref|XP_001087561.1| PREDICTED: similar to complexin 4 [Macaca mulatta]
152.0 [0..1] [158..1]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFMVKSMVG GQLKNLTGSL GGGEDKGDGD KSAAEAQGMS REEYEEYQKQ LVEEKMERDA  60
   61 QFTQRKAERA TLRSHFRDKY RLPKNETDES QIQLAGGDVE LPRELAKMIE EDTEEEEDKA 120
  121 SVLGQLASLP GLDLSSLKDK AQTTLGDLKQ SAEKCHIM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.408935
Match: PF05835.3
Description: No description for PF05835.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle