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View Structure Prediction Details

Protein: gi|125551105
Organism: Oryza sativa Indica Group
Length: 570 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125551105.

Description E-value Query
Range
Subject
Range
gi|46850200 - gi|46850200|gb|AAT02533.1| NADP-dependent malic enzyme 1 [Hydrilla verticillata]
840.0 [0..2] [570..86]

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Predicted Domain #1
Region A:
Residues: [1-570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGVEDTY GEDRATEDQL ITPWSFSVAS GYTLLRDPRH NKGLAFSEAE RDAHYLRGLL  60
   61 PPSIVSQELQ EKKLMHNLRN YTVPLQRYIA MMDLQERNER LFYKLLIDNV EELLPVVYTP 120
  121 TVGEACQKYG SIYRRPQGLY ISLKDKGKIL EVLKNWPERS IQVIVVTDGE RILGLGDLGC 180
  181 QGMGIPVGKL SLYTALGGVR PSACLPITID VGTNNESLLN DEFYIGLKQR RATGEEYHEL 240
  241 LEEFMTAVKQ NYGEKVLVQF EDFANHNAFD LLAKYSKSHL VFNDDIQGTA SVVLAGLIAA 300
  301 LKVVGGTLAD HTYLFLGAGE AGTGIAELIA LEMSKQTEIP INDCRKKVWL VDSRGLIVES 360
  361 RKESLQHFKQ PFAHEHEPVK TLLEAVQSIK PTVLIGTSGV GKTFTQEVVE AMAAFNEKPV 420
  421 IFALSNPTSH SECTAEEAYT WTKGSAVFAS GSPFDAVEYE GKTYVPGQSN NAYIFPGFGL 480
  481 GVVISGAIRV HDDMLLAASE ALAEQVSEDN FARGLIFPPF TNIRKISAHI AAKVAAKAYE 540
  541 LGLASRLPRP DDLVKYAESC MYTPAYRCYR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2aw5A
Description: Crystal structure of a human malic enzyme
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle