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View Structure Prediction Details

Protein: gi|116309662
Organism: Oryza sativa Indica Group
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116309662.

Description E-value Query
Range
Subject
Range
gi|40253263, gi|... - gi|50942779|ref|XP_480917.1| putative Aldose 1-epimerase [Oryza sativa (japonica cultivar-group)], g...
gi|218200730 - gi|218200730|gb|EEC83157.1| hypothetical protein OsI_28370 [Oryza sativa Indica Group]
328.0 [0..13] [325..25]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATASWPPTP RSPRPQAPSV ERAKGPSGLD KVVLREARGF SAEVHLYGGQ VTSWKNDRGD  60
   61 ELLFVSSKAT FKPPKAIRGG IPICFPQFGT HGILEKHGFA RNRFWAIDDN PPPFPTSTAA 120
  121 KAFVDLILKT SEEDLKIWPH SFEFRLRVAL GPGGDLALTS RIRNTNTDGR PFSFTFAYHT 180
  181 YFSVSDISEV RIEGLETLDY IDCLRGKERS TEQGDAIVFE SEVDKIYLDA PAKIAIIDHE 240
  241 KKRTFVLRKD GLPDAVLWNP WDKRTKNMQD FGDEEYKHML CVEPAAVEKP ITLKPGEEWK 300
  301 GKMDLSAVPS SYCSGQLDPN KVLQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 2htaA
Description: No description for 2htaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle