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View Structure Prediction Details

Protein: gi|125551610
Organism: Oryza sativa Indica Group
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125551610.

Description E-value Query
Range
Subject
Range
gi|86282729, gi|... - gi|86358627|ref|YP_470519.1| 50S ribosomal protein L25 [Rhizobium etli CFN 42], gi|86282729|gb|ABC91...
243.0 [0..49] [258..26]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLLRRPLR ALTLPLLRPH LSTAAAAEVS PADHHPDLLS PPFGYLPGHP RPDAKHDELI  60
   61 LAVPRASPGR HVAAKERKAG RVPAIVFEQE NGQEGGNKRL VSVQSKQIRK LVDHLGRSFF 120
  121 LSRLFRLQVW SEHAGQGVLI ESVRVLPRKV HLHAGTDEPL NVTFMRAPSS ALLKIDVPLM 180
  181 FIGDDASPGL RKGAYFNTIK RTVKYLCPAD IVPPYIEVDL SELDVGQKLL MRDLKVHPAL 240
  241 KLLQSPEQPI CSIIGSRAPE QKKSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 1vsaT
Description: No description for 1vsaT was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle