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View Structure Prediction Details

Protein: CYT1_ORYSA
Organism: Oryza sativa
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYT1_ORYSA.

Description E-value Query
Range
Subject
Range
gi|82503157, gi|... - gi|82503157|gb|ABB80380.1| cystatin WC-1 [Triticum aestivum], gi|82503155|gb|ABB80379.1| cystatin WC...
143.0 [0..1] [140..3]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKYRVAGLV AALLVLHSLA TPSAQAEAHR AGGEGEEKMS SDGGPVLGGV EPVGNENDLH  60
   61 LVDLARFAVT EHNKKANSLL EFEKLVSVKQ QVVAGTLYYF TIEVKEGDAK KLYEAKVWEK 120
  121 PWMDFKELQE FKPVDASANA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 1eqkA
Description: Phytocystatin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle