YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|109470946, gi...
Organism: Rattus norvegicus
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|109470946, gi....

Description E-value Query
Range		 Subject
Range
gi|47214624 - gi|47214624|emb|CAG01465.1| unnamed protein product [Tetraodon nigroviridis]
 153.0 [0..1] [188..1]
NAA20_XENTR - N-alpha-acetyltransferase 20 OS=Xenopus tropicalis GN=naa20 PE=2 SV=1
 150.0 [0..1] [188..1]
gi|73991065 - gi|73991065|ref|XP_534329.2| PREDICTED: similar to N-acetyltransferase 5 isoform 1 [Canis familiaris...
 150.0 [0..1] [188..1]
NAA20_DANRE - N-alpha-acetyltransferase 20 OS=Danio rerio GN=naa20 PE=2 SV=1
 150.0 [0..1] [188..1]
gi|50750860 - gi|50750860|ref|XP_422177.1| PREDICTED: similar to N-terminal acetyltransferase complex ard1 subunit...
 149.0 [0..1] [188..1]
gi|60653669 - gi|60653669|gb|AAX29528.1| N-acetyltransferase 5 [synthetic construct]
 149.0 [0..1] [188..1]
NAA20 - N(alpha)-acetyltransferase 20, NatB catalytic subunit
gi|114681197 - gi|114681197|ref|XP_514540.2| PREDICTED: similar to Nat5-prov protein isoform 2 [Pan troglodytes]
gi|149733391 - gi|149733391|ref|XP_001489957.1| PREDICTED: similar to Nat5-prov protein [Equus caballus]
gi|109470944, gi... - ref|XP_342535.1| similar to N-acetyltransferase 5 [Rattus norvegicus], gi|149041205|gb|EDL95138.1| ...
NAA20_MACFA - N-alpha-acetyltransferase 20 OS=Macaca fascicularis GN=NAA20 PE=2 SV=1
NAA20_MOUSE - N-alpha-acetyltransferase 20 OS=Mus musculus GN=Naa20 PE=1 SV=1
gi|123998053, gi... - gi|61361621|gb|AAX42077.1| N-acetyltransferase 5 [synthetic construct], gi|123998111|gb|ABM86657.1| ...
 149.0 [0..1] [188..1]
NAA20_XENLA - N-alpha-acetyltransferase 20 OS=Xenopus laevis GN=naa20 PE=2 SV=1
 149.0 [0..1] [188..1]
gi|66517612 - gi|66517612|ref|XP_397463.2| PREDICTED: similar to CG14222-PA isoform 1 [Apis mellifera]
 146.0 [0..1] [188..1]

Back

Predicted Domain #1
Region A:
Residues: [1-188] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLRAFTCD DLFRFNNINL DPLTETYGIP FYLQYLAHWP EYFIVAEAPG GELMGYSKYS  60
   61 TTSTFLVMGK AEGSVAREEW HGHVTALSVA PEFRRLGLAA KLMELLEEIS ERKGGFFVDL 120
  121 FVRVSNQVAV NMYKQLGYSV YRTVIEYYSA SNGEPDEDAY DMRKALSRDT EKKSIIPLPH 180
  181 PVRPEDIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1yr0A
Description: Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
N-acetyltransferase activity 6.09290029352595 bayes_pls_golite062009
N-acyltransferase activity 6.08913516066746 bayes_pls_golite062009
acetyltransferase activity 5.86411968036951 bayes_pls_golite062009
histone acetyltransferase activity 5.85159161781386 bayes_pls_golite062009
lysine N-acetyltransferase activity 5.85159161781386 bayes_pls_golite062009
acyltransferase activity 4.72881921515185 bayes_pls_golite062009
transferase activity, transferring acyl groups 4.70793039001114 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 4.69837915971204 bayes_pls_golite062009
transferase activity 3.5778020729894 bayes_pls_golite062009
myristoyltransferase activity 3.50779447340192 bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity 3.50779447340192 bayes_pls_golite062009
3.29707445389818 bayes_pls_golite062009
catalytic activity 1.97933499002461 bayes_pls_golite062009
binding 1.07749536895426 bayes_pls_golite062009
nucleic acid binding 0.522132859536345 bayes_pls_golite062009
protein binding 0.098756769132141 bayes_pls_golite062009
transcription regulator activity 0.0766125702622449 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle