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View Structure Prediction Details

Protein: CPLX1_RAT
Organism: Rattus norvegicus
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPLX1_RAT.

Description E-value Query
Range
Subject
Range
gi|15928669, gi|... - gi|31542416|ref|NP_031782.2| complexin 1 [Mus musculus], gi|15928669|gb|AAH14803.1| Complexin 1 [Mus...
160.0 [0..1] [134..1]
gi|30584359, gi|... - gi|61372290|gb|AAX43818.1| complexin 1 [synthetic construct], gi|61372285|gb|AAX43817.1| complexin 1...
154.0 [0..1] [134..1]
CPLX1 - complexin 1
gi|60655261 - gi|60655261|gb|AAX32194.1| complexin 1 [synthetic construct]
153.0 [0..1] [134..1]
gi|108995263 - gi|108995263|ref|XP_001094482.1| PREDICTED: similar to complexin 1 isoform 3 [Macaca mulatta]
CPLX1_MACFA - Complexin-1 OS=Macaca fascicularis GN=CPLX1 PE=2 SV=1
152.0 [0..1] [134..1]
gi|55926107, gi|... - gi|55926107|ref|NP_001007496.1| cplx2 protein [Xenopus (Silurana) tropicalis], gi|51258162|gb|AAH799...
152.0 [0..1] [134..1]
CPLX1_BOVIN - Complexin-1 OS=Bos taurus GN=CPLX1 PE=2 SV=1
151.0 [0..1] [134..1]
gi|189527775, gi... - gi|68373364|ref|XP_683429.1| PREDICTED: similar to complexin 2 isoform 1 [Danio rerio], gi|189527775...
151.0 [0..1] [134..1]
gi|37590711, gi|... - gi|37590711|gb|AAH59299.1| MGC68923 protein [Xenopus laevis], gi|162139014|ref|NP_001080000.1| hypot...
150.0 [0..1] [134..1]
gi|50761882 - gi|50761882|ref|XP_424869.1| PREDICTED: similar to synaphin 2 [Gallus gallus]
149.0 [0..1] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFVMKQALG GATKDMGKML GGDEEKDPDA AKKEEERQEA LRQAEEERKA KYAKMEAERE  60
   61 VMRQGIRDKY GIKKKEEREA EAQAAMEANS EGSLTRPKKA IPPGCGDEPE EEDESILDTV 120
  121 IKYLPGPLQD MFKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 89.420216
Match: PF05835.3
Description: No description for PF05835.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle