| Protein: | lectin-21Cb-PA |
| Organism: | Drosophila melanogaster |
| Length: | 257 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lectin-21Cb-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
178.0 | [0..3] | [256..8] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MPHAPIPYDE RFIRRFPDYR LIDYPQGAQE NNCPKVSLSE RLEKRGEFSL VEFDPLLKFI 60
61 VKNPHKEL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.515 | N/A | N/A | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.514 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.468 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.464 | N/A | N/A | a.159.2 | FF domain |
| View | Download | 0.453 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [69-257] |
1 11 21 31 41 51
| | | | | |
1 LGEIEGLVGH TENKLQPMKS VIPNQSKALL NYLDLHSKLE YLDAALQKAI NSLQCSLKNT 60
61 KVMSTGKPHP EFQKLGSRYF YIERHVRQNW FDAADKCRRM GGHLATPQDE DELYLIRKQL 120
121 EARWFWLDIS NLVDKDQYIS LATGKEVSYL KWRHGEPKKS STANCAYLYA GDYYTYQCSD 180
181 RNFFICQAV
|
| Detection Method: | |
| Confidence: | 27.522879 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13629480035749 | bayes_pls_golite062009 |
| carbohydrate binding | 0.44675717945952 | bayes_pls_golite062009 |
| protein binding | 0.059857076934361 | bayes_pls_golite062009 |
