| Protein: | gi|125590681 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 480 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125590681.
| Description | E-value | Query Range |
Subject Range |
|
|
601.0 | [0..1] | [480..984] |
|
Region A: Residues: [1-322] |
1 11 21 31 41 51
| | | | | |
1 MEEAAAPERK RPRDGDVGPS TAASGEAQYV YLPIADALKA PGARVCLFAA VSEIGAAVRS 60
61 RGTDFTLTLR IVDHSRASAI SVTFFADNTA LLPCVRSSGD VISLHNVVIT MHHGEFFVTY 120
121 NKRFSSFALF EGKVSTGCIP YQHSMKYHGS KHDSEFLTHL RMWIVYNPPG LKDLELQLRS 180
181 IKSDSTFDLV CKVLDVHEAS NGVWILYVWD GTDTPVTEFP TLDNESVSPP PLHLEGAPLP 240
241 REVLCTLPCV GSVLRVFSNR FFKEMLHLQK GIYWARFCNM TCKQQFGMWK GILLPSSRVR 300
301 LLSNEDGSVA DRLKLFDSRI AT
|
| Detection Method: |  |
| Confidence: | 88.09691 |
| Match: | 1xjvA |
| Description: | Crystal structure of human POT1 bound to telomeric single-stranded DNA (TTAGGGTTAG) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.141433535514844 | bayes_pls_golite062009 |
|
Region A: Residues: [323-480] |
1 11 21 31 41 51
| | | | | |
1 QIHRQPMASL PNASDIADVE YERAGYTTLM ESLTHGEVTH KFKTLVRVVA AYPRGASHLC 60
61 SLLAGNCCLR LTLEDPTARI HAYIHKDDGA KFFGGFLTAE AVIRKMNKLL GIPEDTEEGA 120
121 PSNRNPPWIW CCLKSYRLDK NDPWGSRRYR IFGTEIRD
|
| Detection Method: | |
| Confidence: | 1.36 |
| Match: | 1jb7A |
| Description: | Telomere end binding protein alpha subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.058699327370023 | bayes_pls_golite062009 |
