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View Structure Prediction Details

Protein: CG5177-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5177-PA, FBpp0....

Description E-value Query
Range
Subject
Range
TPS9_ARATH - Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE...
192.0 [0..5] [276..566]
gi|113533672, gi... - gi|34910846|ref|NP_916770.1| putative trehalose-6-phosphate synthase [Oryza sativa (japonica cultiva...
189.0 [0..5] [272..582]
gi|55792824 - gi|55792824|gb|AAV65495.1| trehalose 6-phosphate synthase [Gossypium hirsutum]
186.0 [0..5] [269..566]
gi|60265773, gi|... - gi|60265773|gb|AAX16015.1| trehalose-6-phosphate synthase [Ginkgo biloba], gi|60265771|gb|AAX16014.1...
186.0 [0..5] [275..566]

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Predicted Domain #1
Region A:
Residues: [1-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQKKAPLL KKEEDYVKAL EGFINPETDQ VALLLDYDGT LAPLTEELSV MPKDTEINIK  60
   61 KLAANEKIFM VVFSGRELSE IKNHLKFPNV TYAGNHGLEV EYPSGKKFKI EMPEELLEKH 120
  121 NKLVSELKEK VVCSGAWVED KKISVTYHYK GVTDKLKAKL IAEAKGLIQA HGFQLIETPY 180
  181 ALEGKPRVNW DKGEGAKMIL EKQFDADWAK NLKIVYVGDD TTDEDAIKVL HGIGKTFRVS 240
  241 ELPTLKTYAN YQIKTVEEVG YLLKAVQAYY EKKKKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle