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View Structure Prediction Details

Protein: Gr43a-PB
Organism: Drosophila melanogaster
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr43a-PB.

Description E-value Query
Range
Subject
Range
Gr43a-PA - The gene Gustatory receptor 43a is referred to in FlyBase by the symbol Dmel\Gr43a (CG1712, FBgn0041...
239.0 [0..1] [449..1]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISQPSIGI FYISKVLALA PYATVRNSKG RVEIGRSWLF TVYSATLTVV MVFLTYRGLL  60
   61 FDANSEIPVR MKSATSKVVT ALDVSVVVMA IVSGVYCGLF SLNDTLELND RLNKIDNTLN 120
  121 AYNNFRRDRW RALGMAAVSL LAISILVGLD VGTWMRIAQD MNIAQSDTEL NVHWYIPFYS 180
  181 LYFILTGLQV NIANTAYGLG RRFGRLNRML SSSFLAENNA TSA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IKPQKVSTVK NVSVNRPAMP SALHASLTKL NGETLPSEAA GDKAAARSLI LNVELLKLGY  60
   61 FPAKNKGLLL KSLADSHESL GKCVHLLSNS FGIAVLFILV SCLLHLVATA YFLFLELLSK 120
  121 RDNGYLWVQM LWICFHFLRL LMVVEPCHLA ARESRKTIQI VCEIERKVHE PILAEAVKKF 180
  181 WQQLLVVDAD FSACGLCRVN RTILTSFASA IATYLVILIQ FQRTNG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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