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View Structure Prediction Details

Protein: CG8642-PA
Organism: Drosophila melanogaster
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8642-PA.

Description E-value Query
Range
Subject
Range
gi|21432054, gi|... - gi|31377646|ref|NP_116232.2| fibrinogen C domain containing 1 [Homo sapiens], gi|21432054|gb|AAH3295...
246.0 [0..5] [331..131]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKIAESAAT IKDKENEINK LQTKDQTGDE LLRKFENLTQ VCSAQQSSFT TAIKEKDEQI  60
   61 KELEQKVKVY ETRLKRKQHV LAELRKLNGS SALLIEHLKG KVVYFERKFR EKKDDLLADW 120
  121 EAATTSCVPF GRSPGIHLIH LPGFLPFLVP CEGQTAAGPG WTCIQRRLDG SVNFYRNWDA 180
  181 YSKGFGKLNG EFFIGLEKLH RLTSSQPHEL YISIRRFGGE TSYAHYDDFL IGSEEEGYEL 240
  241 KLLGHYQGNA SDALRTHDKM KFSTYDRDND AFTHMNCAEH HQGAWWYDFC SRSNLNGRYF 300
  301 KGEVDNPQSI YWEPWYSFRS LKSVQMLIRP KSQLELKDLP RPMRPPG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.30103
Match: 1deqC
Description: Fibrinogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle