| Protein: | ptc-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1286 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-1129] |
1 11 21 31 41 51
| | | | | |
1 MDRDSLPRVP DTHGDVVDEK LFSDLYIRTS WVDAQVALDQ IDKGKARGSR TAIYLRSVFQ 60
61 SHLETLGSSV QKHAGKVLFV AILVLSTFCV GLKSAQIHSK VHQLWIQEGG RLEAELAYTQ 120
121 KTIGEDESAT HQLLIQTTHD PNASVLHPQA LLAHLEVLVK ATAVKVHLYD TEWGLRDMCN 180
181 MPSTPSFEGI YYIEQILRHL IPCSIITPLD CFWEGSQLLG PESAVVIPGL NQRLLWTTLN 240
241 PASVMQYMKQ KMSEEKISFD FETVEQYMKR AAIGSGYMEK PCLNPLNPNC PDTAPNKNST 300
301 QPPDVGAILS GGCYGYAAKH MHWPEELIVG GAKRNRSGHL RKAQALQSVV QLMTEKEMYD 360
361 QWQDNYKVHH LGWTQEKAAE VLNAWQRNFS REVEQLLRKQ SRIATNYDIY VFSSAALDDI 420
421 LAKFSHPSAL SIVIGVAVTV LYAFCTLLRW RDPVRGQSSV GVAGVLLMCF STAAGLGLSA 480
481 LLGIVFNAAS TQVVPFLALG LGVDHIFMLT AAYAESNRRE QTKLILKKVG PSILFSACST 540
541 AGSFFAAAFI PVPALKVFCL QAAIVMCSNL AAALLVFPAM ISLDLRRRTA GRADIFCCCF 600
601 PVWKEQPKVA PPVLPLNNNN GRGARHPKSC NNNRVPLPAQ NPLLEQRADI PGSSHSLASF 660
661 SLATFAFQHY TPFLMRSWVK FLTVMGFLAA LISSLYASTR LQDGLDIIDL VPKDSNEHKF 720
721 LDAQTRLFGF YSMYAVTQGN FEYPTQQQLL RDYHDSFVRV PHVIKNDNGG LPDFWLLLFS 780
781 EWLGNLQKIF DEEYRDGRLT KECWFPNASS DAILAYKLIV QTGHVDNPVD KELVLTNRLV 840
841 NSDGIINQRA FYNYLSAWAT NDVFAYGASQ GKLYPEPRQY FHQPNEYDLK IPKSLPLVYA 900
901 QMPFYLHGLT DTSQIKTLIG HIRDLSVKYE GFGLPNYPSG IPFIFWEQYM TLRSSLAMIL 960
961 ACVLLAALVL VSLLLLSVWA AVLVILSVLA SLAQIFGAMT LLGIKLSAIP AVILILSVGM1020
1021 MLCFNVLISL GFMTSVGNRQ RRVQLSMQMS LGPLVHGMLT SGVAVFMLST SPFEFVIRHF1080
1081 CWLLLVVLCV GACNSLLVFP ILLSMVGPEA ELVPLEHPDR ISTPSPLPV
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1oy6A |
| Description: | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains; Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains; Multidrug efflux transporter AcrB transmembrane domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1130-1286] |
1 11 21 31 41 51
| | | | | |
1 RSSKRSGKSY VVQGSRSSRG SCQKSHHHHH KDLNDPSLTT ITEEPQSWKS SNSSIQMPND 60
61 WTYQPREQRP ASYAAPPPAY HKAAAQQHHQ HQGPPTTPPP PFPTAYPPEL QSIVVQPEVT 120
121 VETTHSDSNT TKVTATANIK VELAMPGRAV RSYNFTS
|
| Detection Method: | |
| Confidence: | 0.983 |
| Match: | 2f73A |
| Description: | Crystal structure of human fatty acid binding protein 1 (FABP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.41587219066945 | bayes_pls_golite062009 |
| transporter activity | 2.0790253220851 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.92165376847661 | bayes_pls_golite062009 |
| lipid binding | 0.7017061461628 | bayes_pls_golite062009 |
| protein binding | 0.213758754904511 | bayes_pls_golite062009 |
| transcription regulator activity | 0.208634580746698 | bayes_pls_golite062009 |
