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View Structure Prediction Details

Protein: CG8046-PA
Organism: Drosophila melanogaster
Length: 519 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8046-PA.

Description E-value Query
Range
Subject
Range
gi|70984531, gi|... - gi|70984531|ref|XP_747772.1| MFS multidrug transporter [Aspergillus fumigatus Af293], gi|66845399|gb...
gi|159122556 - gi|159122556|gb|EDP47677.1| MFS multidrug transporter, putative [Aspergillus fumigatus A1163]
255.0 [0..1] [516..111]

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Predicted Domain #1
Region A:
Residues: [1-519]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEEPHAHEN LVAKAQRSGD ADPEVASTAS EKQRSSGASA IAVGTEFPGN PQASRPQSLG  60
   61 MYLLEPFILI LLFAYNFSST VLKNEVIYQS CTAGFGYPDS VCQLLGTKNI TNETKRIEEQ 120
  121 VQPYAAQVTL AMRLVECFIP AFCGLFAGSW ADHYGRKPLL MCSFLGYGLQ YLISAAIAYC 180
  181 AMYTQGLVSP WWYVLSIVPL SCLGSSVTYS VAAVCFIADV SGGKVRSYRM IAYELAIYVG 240
  241 LLLGSLGSGY AYEATDAYIV FSISAVCIFT ALFLMALLLP ESLPARNRTL STPTTDTSVV 300
  301 SMLKSLWSTC SKPREHQNRF MLTTIMVVLL LTAFVSDGSN SVFYKFMRIK FHWTVKQFTE 360
  361 YETVGILVPA VAGSGGVLFI WSLRKCTNSA ILWLALVSLL SHCSSSLMKG FALESWQIYV 420
  421 AIGLGVFKSL VNPMCRTMIT NLLPADERGK IFALLGVLQA LSPLISSTLY VAIYTRTLNT 480
  481 EPGIFNVFSA FLFGIGIILL GTVWHKKSRN LVYYEPVFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.30103
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle