YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG8046-PB
Organism: Drosophila melanogaster
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8046-PB.

Description E-value Query
Range
Subject
Range
gi|67536615, gi|... - gi|67542336|ref|ZP_00420273.1| General substrate transporter:Major facilitator superfamily [Burkhold...
187.0 [0..2] [370..325]

Back

Predicted Domain #1
Region A:
Residues: [1-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVECFIPA FCGLFAGSWA DHYGRKPLLM CSFLGYGLQY LISAAIAYCA MYTQGLVSPW  60
   61 WYVLSIVPLS CLGSSVTYSV AAVCFIADVS GGKVRSYRMI AYELAIYVGL LLGSLGSGYA 120
  121 YEATDAYIVF SISAVCIFTA LFLMALLLPE SLPARNRTLS TPTTDTSVVS MLKSLWSTCS 180
  181 KPREHQNRFM LTTIMVVLLL TAFVSDGSNS VFYKFMRIKF HWTVKQFTEY ETVGILVPAV 240
  241 AGSGGVLFIW SLRKCTNSAI LWLALVSLLS HCSSSLMKGF ALESWQIYVA IGLGVFKSLV 300
  301 NPMCRTMITN LLPADERGKI FALLGVLQAL SPLISSTLYV AIYTRTLNTE PGIFNVFSAF 360
  361 LFGIGIILLG TVWHKKSRNL VYYEPVFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle