YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG33145-PB
Organism: Drosophila melanogaster
Length: 466 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33145-PB.

Description E-value Query
Range
Subject
Range
gi|54636555|gb|E... - GA17319-PA [Drosophila pseudoobscura], GA17319 [Drosophila pseudoobscura pseudoobscura]
gi|125810158, gi... - gi|54636555|gb|EAL25958.1| GA17319 [Drosophila pseudoobscura pseudoobscura], gi|125810158|ref|XP_001...
369.0 [0..11] [466..9]

Back

Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRWNPEKI EEQSSLLAAE YSSSSGAAAS GSEDETVTTS GALRSKAKLR KRQLRNRMPL  60
   61 PRMLRRLGCY TLSAFLICGL LLVYLPLVYL DVHKRSAGLP DWTSET

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRSIADYLDI GLSSGVIVPK DFCRNKTFLV IAVCTGVDNF IQRHTIRETW GNTTEFNYPA  60
   61 FGKLHGHLKG HYLPPLPDRL KMYGDYLSGE GQSLTASVRI VFIVGRQKDE AMLGNETLNR 120
  121 IHIESEKYND IIQENFVDSY NNLTLKSVMA LKHISRSCFN TAVYFLKCDD DTFVNIPNLL 180
  181 NFLLGGTIPL YNDTLDYHDR STYLVTAPQT RLKASSDVLY GHQFCNVVPV SEVSSKWYMP 240
  241 SYMYKPESYP KYLSGAGYLM SIDVVQRLFE ASLNTTLVYL EDVYITGLCA QKAKINRHHH 300
  301 PLFSFAHSKQ MCAFKGTITQ HQLKDDSMVS AWNYVSNYSI KCPPPGRYFS QVRLRKRPIC 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.95
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle