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View Structure Prediction Details

Protein: gi|21627378, gi|...
Organism: Drosophila melanogaster
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21627378, gi|....

Description E-value Query
Range
Subject
Range
gi|125808726, gi... - gi|54636022|gb|EAL25425.1| GA15602-PA [Drosophila pseudoobscura], gi|125808726|ref|XP_001360850.1| G...
213.0 [0..94] [288..1]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVKLVMFNT IRDDHSASNA PRNTAYRMGR ALVGGFDSIR SGPVRFICAP WEMVLASDKS  60
   61 HLKEASDRRV FKMLGVHSLI SNCNSVCVQK FKRFGINMQR VASVDHSNGS RRTRSRRPGP 120
  121 RITGYSSVRH AIHSKMEEIN LGILHADIAS ACFQLLFIAA LLLSLAQARP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [171-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVRGQAPGEP IPIIRQEQEV NFDGSYKYLY ETGNGINAEE EGYLKNPGTD NAGQVAQGSF  60
   61 SYTSPEGIPI RITYLADENG FQPQGDHLPT PPPIPPAIQK ALAYLATAPP PPQEQPGGFN 120
  121 NRRETWTTSE YRGSTSKKFQ QPAVPGGERC NASPLNRFYR 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.468521
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle