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View Structure Prediction Details

Protein: FBpp0308787, CG1...
Organism: Drosophila melanogaster
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308787, CG1....

Description E-value Query
Range
Subject
Range
gi|16186101 - gi|16186101|gb|AAL13999.1| SD05126p [Drosophila melanogaster]
330.0 [0..1] [700..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCESCGVEF TVFRRKRACF DCKRYYCANC IASRRCKRCS VFAQRPLSRT DLLKLKPKDL  60
   61 IFYLQSKHIS TEGCLEKEEL VGLVLTHVAQ VDRSRGSNAS SNSPGRGQAN PIDSLKQSCQ 120
  121 NFFSNLSDNI SDSLASFDSK VTTKPPESR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 1y02A
Description: Crystal Structure of a FYVE-type domain from caspase regulator CARP2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.59453362121051 bayes_pls_golite062009
protein binding 0.705012166135047 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [150-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPEVPTHIFE QPRVSTREIP TYASAVNGGP QHVHVQQQAT TTNGGSQSSS SPSTSTQSSN  60
   61 NRDASSSSQA HVAHQEARNE EQEDAQSKSD CECSDEEIMA TFSERVSISL KTDTSGRRVN 120
  121 AAAEPSPVDL ANVDNGPAGN TAPSPGCSKP GSSSSKADAS SQSSFEELGA IGGISDESK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [329-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANTDTNSSHL DQWQVLEVNR IEAVEETPTT SAADEILEVT LRSRPAVEGD DSEMGESTQA  60
   61 LNVNQRPANP SPAFYPAVPQ RTKKVTRRRS DGYLNRRYHS SDDESPVAPG GPGLSLGLST 120
  121 LSEHPEHGLH PHSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [463-622]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQSCQRCGKN KTNIRRHVEK MRRHLENSQM SEEDIKRELQ EFLTYLEQRT KSVDASDADS  60
   61 HAVSPLSVDA ISVAAGGRSP DMPITPTIEF SPTQDEDIRW DDDEGIHVYA APSDFEPTAG 120
  121 IDSRFVNLED FEDLKDLEGL TVKQLKEVLM LHRVDYKGCC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [623-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKQELLDRVS RLWKTMRECP AVEKLATDEL CKICMDAPIE CVFLECGHMA TCTSCGKVLN  60
   61 ECPICRQYIV RVVRFFRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.522879
Match: 1fbvA
Description: Cbl; N-terminal domain of cbl (N-cbl); CBL
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle