YRC Public Data Repository - Protein Structure Prediction

Protein:	CG6543-PB, CG6543-PA
Organism:	Drosophila melanogaster
Length:	295 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6543-PB, CG6543-PA.

Description	E-value	Query Range	Subject Range
gi\|20807045, gi\|... - gi\|20807045\|ref\|NP_622216.1\| 3-hydroxybutyryl-CoA dehydratase [Thermoanaerobacter tengcongensis MB4]... gi\|20807045 - gi\|20807045\|ref\|NP_622216.1\| enoyl-CoA hydratase [Thermoanaerobacter tengcongensis MB4]	291.0	[0..36]	[294..1]
gi\|125810735, gi... - gi\|54636777\|gb\|EAL26180.1\| GA19673 [Drosophila pseudoobscura pseudoobscura], gi\|125810735\|ref\|XP_001... gi\|125810735\|ref... - GA19673-PA [Drosophila pseudoobscura], GA19673 [Drosophila pseudoobscura pseudoobscura]	288.0	[0..1]	[295..1]
gi\|28204455, gi\|... - gi\|28212012\|ref\|NP_782956.1\| 3-hydroxybutyryl-CoA dehydratase [Clostridium tetani E88], gi\|28204455\|...	286.0	[0..40]	[294..2]
gi\|70606884, gi\|... - gi\|70606884\|ref\|YP_255754.1\| 3-hydroxybutyryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM 639],...	286.0	[0..39]	[295..406]
gi\|241218800, gi... - gi\|241769557\|ref\|ZP_04766976.1\| Enoyl-CoA hydratase/isomerase [Sulfolobus solfataricus 98/2], gi\|241... gi\|25291790 - pir\|\|A90436 enoyl CoA hydratase (paaF-7) [imported] - Sulfolobus solfataricus gi\|13815932, gi\|... - gi\|15899349\|ref\|NP_343954.1\| enoyl CoA hydratase (paaF-7) [Sulfolobus solfataricus P2], gi\|13815932\|...	285.0	[0..38]	[295..9]
gi\|15920248, gi\|... - gi\|15920248\|ref\|NP_375917.1\| 3-hydroxybutyryl-CoA dehydrogenase [Sulfolobus tokodaii str. 7], gi\|156...	284.0	[0..41]	[295..397]
ECHM_MOUSE - Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1	283.0	[0..1]	[294..1]
gi\|157104013, gi... - gi\|157104013\|ref\|XP_001648219.1\| cyclohex-1-ene-1-carboxyl-CoA hydratase, putative [Aedes aegypti], ...	283.0	[0..1]	[295..1]
gi\|18145966, gi\|... - gi\|18311283\|ref\|NP_563217.1\| 3-hydroxybutyryl-CoA dehydratase [Clostridium perfringens str. 13], gi\|... gi\|110673862, gi... - gi\|110799215\|ref\|YP_696975.1\| 3-hydroxybutyryl-CoA dehydratase [Clostridium perfringens ATCC 13124],... gi\|182625533, gi... - gi\|182625533\|ref\|ZP_02953304.1\| 3-hydroxybutyryl-CoA dehydratase [Clostridium perfringens D str. JGS... gi\|170715197, gi... - gi\|170715197\|gb\|EDT27379.1\| 3-hydroxybutyryl-CoA dehydratase [Clostridium perfringens CPE str. F4969...	281.0	[0..44]	[295..6]

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Predicted Domain #1

Region A:
Residues: [1-295]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANIAKIFAS RAQCVLQAAA RQPQVATRFS SSSTNNNWEY IKTEVAGEGK NVGVITLNRP  60
   61 KALNALCNGL MKELSTALQQ FSKDKTISAI VLTGSEKAFA AGADIKEMVG NTYSQCIQGN 120
  121 FLNDWTEVAR TQKPIIAAVN GYALGGGCEL AMMCDIIYAG DKAKFGQPEI ALGTIPGAGG 180
  181 TQRLTRVVGK SKAMEMCLTG NMIGAQEAEK LGLASKVVPA DQLLGEAVKL GEKIGTHSNL 240
  241 IVQLCKEAVN TAYETTLQEG LKFERRTFHA TFSTADRKEG MTAFAEKRPA KFTNE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	75.0
Match:	2hw5A
Description:	No description for 2hw5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits