| Protein: | CG8468-PA, CG846... |
| Organism: | Drosophila melanogaster |
| Length: | 678 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8468-PA, CG846....
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..1] | [678..1] |
|
Region A: Residues: [1-343] |
1 11 21 31 41 51
| | | | | |
1 MATQQTKSQD ELASKGLVSK QPENIKEENE GEEEIEEAAV VVPPDSGWAW VVMVASFLCC 60
61 TVIDGIVFCS GLIQEQLMAE FGVSKAYVAF VSSLLSGCYL MAGPFVSAMA NRFGFRPVTI 120
121 TGAIFAAICF GLSYFATSVE YLFLIYGVLG GIGFCMVYIP AVVIIGFYFE KWRALATGVA 180
181 MCGSGVGTFV FAPLTKILLK SGWRYTLAIQ GIIVLSCALF GLAFRPIQPI TLSVTNEEGD 240
241 EQEKKKLNGH GNTVAPTPQL HQAAFTKPLP EGRFAYSMPN SAHNTYMGAS QRNHYPTAQE 300
301 IFKGMNLERR PSGTAQGSKG TELKQLRKSQ PTTPNGDPQQ LTF
|
| Detection Method: |  |
| Confidence: | 35.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.118997796261274 | bayes_pls_golite062009 |
|
Region A: Residues: [344-461] |
1 11 21 31 41 51
| | | | | |
1 NLHKELTTVG ENEEEAENDN LLETEAKPVT IQARRHTVSG RRPQDIGKRS AAAAHEAHHG 60
61 QSHSSSRPMY RDDIFFSGSL TRIPQYQSQT SLAYHMSVTR LPTKQDMLED RQKGCRIC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [462-678] |
1 11 21 31 41 51
| | | | | |
1 PEAVRRTLST MLDTTLLKSP AFMCLAFSGF LTMMGFFVPF TFLVDRAKAA GMDEQAAYGV 60
61 LSGIGVVNTF ARIVCGSLSS FPAVKPLWLN NFALTAGGIA TICSGIVINT ATQWTFALFF 120
121 GICIACFSAL RSLIAVELIG LEKLTNAYGF LMLFQGLAAT FGSPIAGGLY VMTGSYNAAF 180
181 YFAGGLILLS AFLCYPLTWV SRWEERRNEK LTPLPAA
|
| Detection Method: | |
| Confidence: | 3.83 |
| Match: | 2gfpA |
| Description: | No description for 2gfpA was found. |
