| Protein: | row-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1281 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for row-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
950.0 | [0..1] | [1121..1] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MTRVTRSEIS LDMEFWVEEL SPAQLAYYEK ITNEHNAVKG ALKNAVSANE GKELFNGQVF 60
61 QAYSFKGKVL QELKEATLPK KPPKPTDSPS TPAAQSGGTG RGRGRPPRQP SNIAYLESSD 120
121 EGDDDMPLAK RLALSAGKKA VAVANASSSF TPKSSKKAAS AASGGSSSPV PKSSGKLFKE 180
181 SKP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [184-332] |
1 11 21 31 41 51
| | | | | |
1 DIESPPKNYR PAEVNSVGGL VVGSTDESKD SKDGKDGKDN KMQGKTYPSL VVLAKPFLKI 60
61 KDMAATRSKL DSKVKLVLML TPNKFCEWLL QEGLLRAQQH CINHRNNELK LGIYSDVTKF 120
121 PYTGGYVWIS ECCPYRFVSV FNNSIFEGA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [333-486] |
1 11 21 31 41 51
| | | | | |
1 QHPPTFLLKL IYHWACQTSI QNVVQWVKVD SVYIKGIYTW LRAICTLAVH QKCKKLGGPG 60
61 KFVEVGVISL GTTSQDGSQR QVKVEVLGVY DYAEKSIRLR AVEPITDGDR NYKKRFQAIL 120
121 EPLSRWVHKD STICIDLTVD KITLFSMGFK NIVQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [487-851] |
1 11 21 31 41 51
| | | | | |
1 AAATDNTAKH NNSAVMEYLR RIVPRMFQNT LSLLSRQMIQ QFLDELVWRE SFGTYALQAF 60
61 NNIIIHIAEQ TRVTTNETIT QRLYQVATNP FKDWSILPAN YKETPANAAP KRLKKPINDA 120
121 DYVVSNKIPK KEKDRDIASS GVKRGRPPNA LGTPPPQLPI KKGPGRPPGS TNQTKGDRAT 180
181 TSSSKSLSKS LIAKGLGKKP KEKDEKIPMV IKKEEDDLRG LEELYYGISD GTDEYHEIFP 240
241 YSTPRTVHNE LAKTVECPIC LNGDSFDSNE KLQTHLVSHI SPEGKQHQFQ CLFCLEKHPT 300
301 ESVLAKHNQI MHPTETKTEG SPSYYCLICQ QRHNSLHLLT AHLQKVHSTL ELPYWCHSCG 360
361 YRSSS
|
| Detection Method: | |
| Confidence: | 2.46 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [852-899] |
1 11 21 31 41 51
| | | | | |
1 HRDLVRHFYD DHKHQNFLQC PYCLDIFYFS KLGVVNQLRI EHYFMHLD
|
| Detection Method: | |
| Confidence: | 11.39794 |
| Match: | 1llmC |
| Description: | Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [900-971] |
1 11 21 31 41 51
| | | | | |
1 EHINKRDPSL RCQKCSLSFL EKGDLKQHAV QHHVSMTKTN RPVRLLLNNS MLIPPPKIRT 60
61 HHREQPPFST YK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [972-1222] |
1 11 21 31 41 51
| | | | | |
1 RPVFFAFLEG KTCAECNTDF ASEETHYTGW LHCVKCNYQT CCERAQFRHG VECNGNFVDA 60
61 MEVNMPQEMH CICGFATGNG NKMAQHLANC GLSTCYPSLE AASENAVKRN MLDMLGLVRR 120
121 DGETSGEGAD ISETADDVAD QSSDMLPPQE DHHLQQHHQQ VGHQQQMQGQ PNEPQAELQQ 180
181 EYLSAPVEHE PVQNMPVHQS MPVQQTGPIQ FGEMEAAPVL LDTQQQVQPT PDYAQVSVVQ 240
241 QHQQQQPYGL S
|
| Detection Method: | |
| Confidence: | 64.69897 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [1223-1281] |
1 11 21 31 41 51
| | | | | |
1 NYGQSSLATD IDMPLIGELS EPNAPPTPQF LGEVHTPMFD AVAAAEQQHY HAQHHHHPQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
