| Protein: | FBpp0309018, dup-PA |
| Organism: | Drosophila melanogaster |
| Length: | 743 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309018, dup-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
327.0 | [0..2] | [687..760] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MAQPSVAAFF TNRKRAALDD AISIKNRRLV EPAETVSPAS APSQLPAGDQ DADLDTLKAA 60
61 ATGMRTRSGR TARLIVTAAQ ESKKKTPAAA KMEPHIKQPK LVQFIKKGTL SPRKQAQSSK 120
121 LDEEELQQSS AISEHTPKVN FTITSQQNAD NVQRGLRT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [159-298] |
1 11 21 31 41 51
| | | | | |
1 PTKQILKDAS PIKADLRRQL TFDEVKTKVS RSAKLQELKA VLALKAALEQ KRKEQEERNR 60
61 KLRDAGPSPS KSKMSVQLKE FDTIELEVLI SPLKTFKTPT KIPPPTPDKH ELMSPRHTDV 120
121 SKRLLFSPAK NGSPVKLVEV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [299-580] |
1 11 21 31 41 51
| | | | | |
1 PAYKRYASLV ESSRAGQLPL PYKYRHLLDV FKGLDSVVAM FHNRKETITF KKLKPAVQRM 60
61 LRKNFTETHL AQIKHIYPDA FIFSQVKTRN FGSVSKADYF QLIIAPNVEP LPEQQQSEKP 120
121 QHFTKINEDD VLASAQSTSM NPHVMTARMQ RFQSLLLDRA MRAHDQFLRS QDPPIIIEKA 180
181 LTRWHPQFDL ESCPEVELSP LPQPPNVEKY SSAKDILSTA RNLFNCATPM ERAMDRYEAK 240
241 LESEKQQAAE SNKKTEEQQA GEVTRTSTAI QTSQEVPGIS GS
|
| Detection Method: | |
| Confidence: | 13.221849 |
| Match: | 1wlqC |
| Description: | Strucure of Geminin-Cdt1 complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.29569167054278 | bayes_pls_golite062009 |
| DNA binding | 4.90756541371868 | bayes_pls_golite062009 |
| nucleic acid binding | 4.69183445184264 | bayes_pls_golite062009 |
| transcription factor activity | 4.14166958134441 | bayes_pls_golite062009 |
| transcription repressor activity | 3.67170893636603 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
| transcription activator activity | 2.29614125067822 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.48055533524841 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.913018999939773 | bayes_pls_golite062009 |
| transcription factor binding | 0.83705247708153 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.784141484679161 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.697234220778482 | bayes_pls_golite062009 |
| DNA helicase activity | 0.300899564141452 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.195360629877364 | bayes_pls_golite062009 |
| structural molecule activity | 0.111941063082739 | bayes_pls_golite062009 |
|
Region A: Residues: [581-743] |
1 11 21 31 41 51
| | | | | |
1 SKNPTVPETT NQTETAKPTV KDCTVPDASS NLLKGLPKSL IEKIRAKQAA KALEAMTRRP 60
61 SQDQEATKYS RLPELARHLR NVFVTERKGV LTLEVIIKKI QNSFRANLTP QEIEAHLKLL 120
121 AKELPSWASF HEVRKTMYLK VAKDMDMNKI IEKLESVANA KSN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
