| Protein: | bdg-PC, bdg-PA, ... |
| Organism: | Drosophila melanogaster |
| Length: | 1331 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bdg-PC, bdg-PA, ....
| Description | E-value | Query Range |
Subject Range |
|
|
1063.0 | [0..1] | [1331..1] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MSSKEQQAAG RDFKRNSNAY SSLPPTGTGA GCSGAALGSG TGTGKRARSK QHQLEHEQFG 60
61 LSNSLSSESI RQACAYYDDE LSDEDLIEIQ QTPQAFHQQT KQPLQLQPIS FRLGDELGDE 120
121 RSAFCGSQEM QQVPLSTPIK QAAETDEALC VLSELDAILD VHDVSQLNGT CSSGSVNSGS 180
181 DDDKVEDYLM DLDNYLEEMD NALNREDSLI IIDGHTSLKR EP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [223-464] |
1 11 21 31 41 51
| | | | | |
1 RTRTLPLSRK KKSSKKKSED QEAAQGDFQR EHQLRKTFSC SLRPTSQIAS SSGSLETSTE 60
61 PVMDVWRRQS MRRALEQEDT KATVAMEREE DDIPTLLVEL PPRRDAEMRR CFSQGDCQAS 120
121 VAPTVGSQML TEAHIFDNLL QTNARASSEE PRPRQYGRRL EGPPTPVRPL ILAQSRPQSA 180
181 PTRVQMREPQ LQDTPTHPIM STCSELSSAR SSRMPSPVSL PSDSSSSGSS SAEHDQEPDP 240
241 VQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [465-575] |
1 11 21 31 41 51
| | | | | |
1 TTTMCSASST TPLEPLHQLQ LLLREKCGFN SQWPHAGSRT LALIGCTLGV FNMCRFAVLT 60
61 INFGGNFLLQ FLLLSVIFGI PLLWLQMCLG AKIRAGPVSM WKISPICAGV G
|
| Detection Method: | |
| Confidence: | 1.83 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [576-1122] |
1 11 21 31 41 51
| | | | | |
1 IALVMQQCFL ALYSTVSLAW ILVYLRDVFP TAARSGYRWQ EMAFPYRYDA SNATGNLTQT 60
61 VAEYFNVVVL QRLHLANHPD ASGIRFHVND RQLAFYLALI WAAVFLILCK GLKSLGKLAY 120
121 IIYTLPLVAL AVVTAKFVYV VDPSRIQNIF AASDFDDFLV NSNSWTAATQ ETFLTWGLLG 180
181 ASVIAITSRS HTNANKAALR RDAILLVLFT LIGLGLMALL ALCCAQILWQ HGYVYVPGSF 240
241 ENPDCYTSIY SLQSNTNPYL LSYPRSLIPH YSSFIGETYR RNRTMIHVES GFQALRFISE 300
301 IFPAVLSLAS DSISWVWAAV AFATFAGFGL AQLCVMWKPI SSALGNSTSS VLLSCVTGLL 360
361 LSIPFATEMG ISILYYVDFL LGGSWFIPII WTAQIFGVFL IRGRPYNGDD LVNDLRLCGS 420
421 MSAFLALSWN VLLPIGLITL SVVDYKASLS NQFYYWRGKS YFTYWSRKMG SLIQIGVLLV 480
481 IPVTAIIQIY RYLAHGPPDI LERIQLLYRP PEEGEEPRRP SARQTASQSR RNALGQTTEG 540
541 GQHDAQN
|
| Detection Method: | |
| Confidence: | 137.0 |
| Match: | 1occA |
| Description: | Mitochondrial cytochrome c oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 2.73170381418733 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.62482996567382 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.27184952386199 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.17385920299423 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.99291315963413 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.91328118970772 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 1.80711393777315 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.46596274907844 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 1.33785775698886 | bayes_pls_golite062009 |
| catalytic activity | 0.295281150854022 | bayes_pls_golite062009 |
| binding | 0.268640698115938 | bayes_pls_golite062009 |
|
Region A: Residues: [1123-1331] |
1 11 21 31 41 51
| | | | | |
1 DAPPKYTPPP SYTTATGARL AKLLRQSIRR SVRRVLGDSS RTRPVLSLDA ESASPAAPPD 60
61 YLTILTNPAG SSFNADPSPA SSSSPESIEI DQRPVGYSQR SQSLGRKLHR SGASTLERRP 120
121 YTAEDVVTIL RSSVRHRQSQ GGGNLVTAST LPRPPTAAMS THLEDASFRS IENLVLNAEP 180
181 PDRTPGVELE LELEAGQAEE CARNNTSVI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
