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View Structure Prediction Details

Protein: Atg7-PB
Organism: Drosophila melanogaster
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Atg7-PB.

Description E-value Query
Range
Subject
Range
ATG7_CHICK - Ubiquitin-like modifier-activating enzyme ATG7 OS=Gallus gallus GN=ATG7 PE=2 SV=1
342.0 [0..29] [501..220]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEKEIILQ FAPWESFVSP TFWHKLAELK LDHDRLSDSK RSITGHYTNR NASGCLLEVD  60
   61 YTAYNSPSFV GKPLKFLGLR HNQQMNIDDS LVWKVIQTEA CDLSQSENIK FVGWELNKNG 120
  121 KMGPR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCMRDSMDP AKLAENSVNL NLKLMKWRLV PDLNLEIISQ TKCLLFGAGT LGCAVARNLL  60
   61 SWGFKHITLL DSGKVGFSNP VRQNLYTHAD AVAGNRMKAT TAAQRLKEIN PSAETAGYVL 120
  121 EIPMPGHTIG ESLLAQTKEH LKVIEKLVQD HDVIFLLTDS RESRWLPTLL GAAKEKIVIN 180
  181 AALGFDSYLV MRHGTTRKEA GDDGQEIEGL KCINGDQLGC YFCNDVTAPG NSLKDRTLDQ 240
  241 QCTVTRPGVS NIAASYAVEL LVALLQHPRK ELAPAYYAQS GRGRSEETEE KVPEGLLGIL 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.522879
Match: 1jw9B
Description: Molybdenum cofactor biosynthesis protein MoeB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.59245438598251 bayes_pls_golite062009
binding 0.09659262506609 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [426-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHSIRGMLCN YENILPATQK FAQCIACSAA VLNEYKKEGH AFLFKTFETA KFLEDLTGIS  60
   61 EFKRLNSEII DFDDEEFDMS DSDED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle