| Protein: | sec6-PA |
| Organism: | Drosophila melanogaster |
| Length: | 738 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec6-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
448.0 | [0..1] | [735..24] |
|
Region A: Residues: [1-363] |
1 11 21 31 41 51
| | | | | |
1 MDLQQLEEQA RQAALKDIQN MLQRPGQLEK VEQYRHRIAR KKASVEALLK TGMQGQLDGV 60
61 RVGLKQLETC MQDVREVRRR MDEVERLLRG VPEVYDALEV VREENTKHSQ YATAMENLKH 120
121 IFNVDASVQK TMALIEDDKL LNAHQCLADL ENSRDDLLYE LHKQPKQHAS DKITLKRHFE 180
181 KVDTVSQELE KKLRLILSRT LNTLRKKPTI IVTALRIIER EEKNDQFALQ QQKVTGFLPP 240
241 GRPKAWRRMI MDVLQQSVIT RIEGSKLEER ADNKMWLVRD LEILRQIILE DLRVVKSLCV 300
301 PCFPPHYDIF GEYVKFYHEG LSSYLDNIVR SGLEGNEYVS MMAWVTHTYP GVELMSHPDL 360
361 NVD
|
| Detection Method: |  |
| Confidence: | 13.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [364-738] |
1 11 21 31 41 51
| | | | | |
1 VHRQIGTLLR PEHLKALEDE YLQNMQRNFQ EWMTKAAETE KQEWFTETVP DQDEEYYHTS 60
61 APVIIFQMID QHLQVTNTIH QELTFKALVM SIQQVEIFGQ TYLKNVIELK EHHFRNRDQI 120
121 KYFTHYIITI VNNSQQMVEL AQQMKQLYWP KSRTEHYEDF ERLLATFQRI RAHAASYLLE 180
181 EAFLDMECHF NDLFTAKWLA SNIAVDTICV TLDDYFQDYN HLRPNNFEMV INEAQKLLAK 240
241 RYIRALLSKR LSKPRAECDA ITRKIKTEAK RFKLFFEKIA PKISLSDSPL DLISTLSALL 300
301 SSDIELLVLD LHTLLGSYPS LNEDHLVRLF YIRNDVKAAE VREKVQDAMK SKKAMVSIAK 360
361 QDCIFKEIVF SDKLW
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 2fji1 |
| Description: | No description for 2fji1 was found. |
