Protein: | sec6-PA |
Organism: | Drosophila melanogaster |
Length: | 738 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec6-PA.
Description | E-value | Query Range |
Subject Range |
|
448.0 | [0..1] | [735..24] |
Region A: Residues: [1-363] |
1 11 21 31 41 51 | | | | | | 1 MDLQQLEEQA RQAALKDIQN MLQRPGQLEK VEQYRHRIAR KKASVEALLK TGMQGQLDGV 60 61 RVGLKQLETC MQDVREVRRR MDEVERLLRG VPEVYDALEV VREENTKHSQ YATAMENLKH 120 121 IFNVDASVQK TMALIEDDKL LNAHQCLADL ENSRDDLLYE LHKQPKQHAS DKITLKRHFE 180 181 KVDTVSQELE KKLRLILSRT LNTLRKKPTI IVTALRIIER EEKNDQFALQ QQKVTGFLPP 240 241 GRPKAWRRMI MDVLQQSVIT RIEGSKLEER ADNKMWLVRD LEILRQIILE DLRVVKSLCV 300 301 PCFPPHYDIF GEYVKFYHEG LSSYLDNIVR SGLEGNEYVS MMAWVTHTYP GVELMSHPDL 360 361 NVD |
Detection Method: | ![]() |
Confidence: | 13.154902 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [364-738] |
1 11 21 31 41 51 | | | | | | 1 VHRQIGTLLR PEHLKALEDE YLQNMQRNFQ EWMTKAAETE KQEWFTETVP DQDEEYYHTS 60 61 APVIIFQMID QHLQVTNTIH QELTFKALVM SIQQVEIFGQ TYLKNVIELK EHHFRNRDQI 120 121 KYFTHYIITI VNNSQQMVEL AQQMKQLYWP KSRTEHYEDF ERLLATFQRI RAHAASYLLE 180 181 EAFLDMECHF NDLFTAKWLA SNIAVDTICV TLDDYFQDYN HLRPNNFEMV INEAQKLLAK 240 241 RYIRALLSKR LSKPRAECDA ITRKIKTEAK RFKLFFEKIA PKISLSDSPL DLISTLSALL 300 301 SSDIELLVLD LHTLLGSYPS LNEDHLVRLF YIRNDVKAAE VREKVQDAMK SKKAMVSIAK 360 361 QDCIFKEIVF SDKLW |
Detection Method: | ![]() |
Confidence: | 42.0 |
Match: | 2fji1 |
Description: | No description for 2fji1 was found. |