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View Structure Prediction Details

Protein: Mgat1-PA
Organism: Drosophila melanogaster
Length: 458 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mgat1-PA.

Description E-value Query
Range
Subject
Range
MGAT1_RAT - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat1...
502.0 [0..6] [458..10]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTRKVLLVI GFLVTWTYAT YYLLLRQTGI HTSRHQSLQA YKLNSQARDA NMQSHHLAKN  60
   61 VFEFVKLKYL EKQPPSVAST PQISIIAAEI SAELPEQHVA KSATARIPTK TYLANG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPVFPVVVFA CNRVSVKKCI DNLVQYRPSV EQFPIIVSQD CGDEPTKEAI LSYGKQVTLI  60
   61 EQPDLSDITV LPKEKKFKGY YKIARHYGWA LNTTFAVGFE FVIIVEDDLN VAPDFFEYFL 120
  121 GTHKLLKQDP SLWCVSAWND NGKAAVVDAA QPELLYRTDF FPGLGWMLTK DLWAELSVKW 180
  181 PKSFWDDWIR HPAQRKDRVC IRPEISRTRT FGKIGVSNGL FFDKYLKHIK LSEDFVQFTK 240
  241 INMSYLLKDN YDNTFLRRVY TYPIVTYDEL RRNLIRIEGP VRIQYTTREQ YKRTTKMLGL 300
  301 MDDFKSGVPR TAYHGIVSFY YNKRRVHLAP NANWKGYELS WS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 1fo8A
Description: N-acetylglucosaminyltransferase I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 2.82233986182523 bayes_pls_golite062009
mannosyltransferase activity 2.58861838579068 bayes_pls_golite062009
catalytic activity 2.25720704697246 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 2.04393180556087 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.77645651562292 bayes_pls_golite062009
UDP-glycosyltransferase activity 1.51711005399931 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.21894113759929 bayes_pls_golite062009
nucleotidyltransferase activity 0.67147527259372 bayes_pls_golite062009
uridylyltransferase activity 0.54930147038803 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 0.48277064848483 bayes_pls_golite062009
alpha-1,2-mannosyltransferase activity 0.464576210651411 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 0.10541627748542 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.0524448119433805 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle