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View Structure Prediction Details

Protein: Gr57a-PA
Organism: Drosophila melanogaster
Length: 416 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr57a-PA.

Description E-value Query
Range
Subject
Range
gi|54636157, gi|... - gi|54636157|gb|EAL25560.1| Gr57a [Drosophila pseudoobscura pseudoobscura], gi|125809098|ref|XP_00136...
gi|125809098|ref... - GA12290-PA [Drosophila pseudoobscura], Gr57a [Drosophila pseudoobscura pseudoobscura]
240.0 [0..1] [416..1]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLYFFREP ETVFDCAAFI CILQFLMGCN GFGIRRSTFR ISWASRIYSM SVAIAAFCCL  60
   61 FGSLSVLLAE EDIRERLAKA DNLVLSISAL ELLMSTLVFG VTVISLQVFA RRHLGIYQRL 120
  121 AALDARLMSD FGANLNYRKM LRKNIAVLGI VTTIYLMAIN SAAVQVASGH RALFLLFALC 180
  181 YTIVTGGPHF TGYVHMTLAE MLGIRFRLLQ QLLQPEFLNW RFPQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [225-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHVQELRIRQ VVSMIQELHY LIQEINRVYA LSLWAAMAHD LAMSTSELYI LFGQSVGIGQ  60
   61 QNEEENGSCY RMLGYLALVM IPPLYKLLIA PFYCDRTIYE ARRCLRLVEK LDDWFPQKSS 120
  121 LRPLVESLMS WRIQAKIQFT SGLDVVLSRK VIGLFTSILV NYLLILIQFA MTQKMGEQIE 180
  181 QQKIALQEWI GF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle