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View Structure Prediction Details

Protein: Ipk1-PA
Organism: Drosophila melanogaster
Length: 621 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ipk1-PA.

Description E-value Query
Range
Subject
Range
gi|73947199 - gi|73947199|ref|XP_541331.2| PREDICTED: similar to chromosome 9 open reading frame 12 [Canis familia...
429.0 [0..3] [417..171]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAERGPRSP GTGQKLRLRA TEPMPQWTAK NLHALLDLPA AMELRQIELI YRAEGNANLV  60
   61 LALPQFKKVL RLPKMISSRL RQAAHQRHEL ADEVARPEGQ RVSSERAGTE NAGDLTMPDF 120
  121 MAYIGIMRRL LGNEFVCGAD IVAIPKEDDR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FWINEHIRAQ RPVSRLDKEF VGPFGLLLPD VTQLPATFDV LLANLQAKGT TGDESGAAAG  60
   61 VGDGGGVGRG AGTRTKNRSA VRRLGDTYAI EIKPKQGWLQ LASDVNDLFD LMP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [264-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGAVTKPKET TCNQEENEPS ARDKCWCRFC SMQLLKMHNG KIKRLGHYCP LDLFSGTPSR  60
   61 MLDALDALLA CPQNNLRVFQ NSNLIYGDHA NSISFDELSS RVFPGEIMVL IKHLLVACLL 120
  121 REYEHPESKR AEGSNQSQKQ QQEQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [408-621]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEPEQLNQSR VSIAATETKA GAAGIGAANV VLPLGGRAAA PVVTAGQSST RTRAAAATAT  60
   61 TQRYTKVARV ETTITRQAAT SMAAGPASSS QLSGNVLATA TATATATAMA TSGRTETKTE 120
  121 PETPAEAAST TSRNVNQNES QKLNRNEPAN QTQAQNNKTE IFRLPKNCVL QKILNLQLLV 180
  181 KVSQPIKLLP KLLSLCPFGF VYSACPPENL GNCR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle