| Protein: | CG13550-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13550-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
459.0 | [0..5] | [1381..1] |
|
Region A: Residues: [1-398] |
1 11 21 31 41 51
| | | | | |
1 MNLDEFSDFN IDQLLGPSAP LQDALVAPYK QVSLPRSNQD VYAKRSRLAE RIAQNDELIR 60
61 QVKQLQAQNK QLADLQRTAQ EVTDLYQKEK QQRIELEKRT KQIGERCGQL EKELDVQVGN 120
121 CENLQEQLQV RGLPVEAKDV LSILMQFSQR LGDDCGLLRR DQNIMKKLRE HCKTIDVSVP 180
181 TPKSPNSRSK RKAHQPGVNQ STQTDEEPAD PKPALCSVAV QVEGLIETRN QATQHKNTTT 240
241 TRGTTTASFI KHHDVGTCFP EPKPLPNIRQ ILDEMLSWRD DVVIEPMSPL SDLQQELQLE 300
301 DVPTNASVAT CTTLCDIHRE IDFVTDLPTQ IKVSASRPPS RTMLDSVKEE ARSSRELAKE 360
361 LFNFLPQNQS CLTNLPPQAF EELWQVFGQM VLALLQRR
|
| Detection Method: |  |
| Confidence: | 14.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [399-491] |
1 11 21 31 41 51
| | | | | |
1 SNPSMATPPS VSQADFTRWL YELYEGTENQ TEQTSNGSTS KRDFATSTEC MDTGTDPIIQ 60
61 SPNISHEGHV TPIRLPSKPK ERKRKSKKRK AAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [492-732] |
1 11 21 31 41 51
| | | | | |
1 TPKPIAKRKC LEMETNNELE VEREQTPETA IQFLSNLETF NMANCDNLEM ELDEEELYLL 60
61 QLTSNAKQNE NKGNVRVQDP DDLKSPAQTS KFPKSENHLP AVLKETASSL KGYDEKQCPF 120
121 PDKTEELMHK KTFEIQENIG SLTELPPNID ISAYPVSMAE VRIVSSNKPS EMEVNASEGT 180
181 DSHLDKSVSN LDTGSMSLFG SDSDVESEYS IEQMAPELSD SDDTFDNSEE DCRSADEPSN 240
241 S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [733-835] |
1 11 21 31 41 51
| | | | | |
1 KKIRNSSLFG SESESDESEE RALEADDLTE AEAKVEEKES EQKSSDVAPA ASSGKLLVVE 60
61 ADLVTKTQPL FVEKLDLENT QHTSTCTNPK ETDESEDEHG LVI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [836-1158] |
1 11 21 31 41 51
| | | | | |
1 DEQIFISQPE EPPLTVPIAA KRRRTQSELK TLSPPGEVRL TRQRAKQLLD EQKSGPEKGL 60
61 SLVEQIRRQL KKAINKSEPF KKDSTHDSKK DSTHDLKPLE HEDELKAMQL GTNFEPIKLS 120
121 CSISEESPAS PPACEPMDEL DPPPIEIPLE QAACTRKDDQ HKSIVQHVLK MDTGLEKLVE 180
181 ANRKTLGKSQ PQLCASIGKY LQENMQLEST CSDLAMDIYK VTKSEAVIVN AMITVICKIG 240
241 LDDGPVERLL NALKYLNFSQ RFLAELEERL FRNTKERPAT ELALNYVRLY LKATALQATM 300
301 SAGYENPARL LLAKILYHFD QDM
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1159-1395] |
1 11 21 31 41 51
| | | | | |
1 PPLVMEVLRQ FPTALPHREQ REYDNSDALI TVIKHLLMNR QYDMQDPNGA ERLLLSKLRF 60
61 EYHFQPYEPS KQQVLENLVG KLKAGREEEL GYAFALFCRR SPHLKVVESV VGEHLMPLAT 120
121 SYCDLAAQNE LYDARLGLLL HCISLVLKPL PLDTDISAFV GFLKRLLVAV PRSGVQLAAV 180
181 KASLRLQRFG FKYTLDALKD YRPNYELDPL TRAMIRCFAK RRRHFRHVAA TGRRTEI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
