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View Structure Prediction Details

Protein: CG3735-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3735-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|109130455 - gi|109130455|ref|XP_001095294.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Macaca m...
386.0 [0..4] [699..238]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKHSKNRA KPYKKPTPAR RNERFSKNYS FIQRSKQMEE SHRRERMPTA PKQEYEPVAE  60
   61 LLPEIQDDVD ETEFYKKLIT GVNNIPTSDI LRSKAE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEEDHVIPVP RKIKPKKEKR SEQLGVDLEI YNSFSKRFDF ELSTDNINDL IARKDVKTIK  60
   61 RNWSALGNVR FDIPRLTEDF KEPDCSEPKD IASTEDLQKL EVKASICANA KLPLTALQSQ 120
  121 LFYIANNYQD IYYPHRTHGN AEDIRYVYCL HALNHMLKVR SLILRNNEKV SALAKSQKMS 180
  181 PNEISIPESF RDQGLKRMKV VFVVPFRESA LRIVNILGDL LFGSQDDQAR KTSIANYERF 240
  241 LGDYSGNTIY FPKTNPKPMD YEQTFSGNTD DNFKLGIRFT KKTMSLFSDM NASDMLIASP 300
  301 LGLRMLVTDK ESDFDFLNSI ELLIIDQAEL FLAQNWENLL HSLDHLHLQP QKLPDTNCQR 360
  361 VRTWCLSGAS SFYRQTLFFS SHELPEFRAV FNSKCNNYQG KVRDSNLVEH GDIRNVLTPI 420
  421 HQVFRLINCS SVETTFDDRF QYFVKNIMPQ FSKPGFSHCM LYVPSYFDYV RIRNHFKTEM 480
  481 VSFVQINEYT KKEKISRARD IFFHSGASVL LYSERAHFFR RTRIKGIRNL IMYQPPNFPH 540
  541 FYSEIINLML KTNQNPRDGF GDEMSVSILY TKYDLLSLSN IVGSENAAKL TSGQKDSYLF 600
  601 STKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.39794
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle