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View Structure Prediction Details

Protein: gammaSnap-PA
Organism: Drosophila melanogaster
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gammaSnap-PA.

Description E-value Query
Range
Subject
Range
gi|115374809, gi... - gi|115374809|ref|ZP_01462084.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1], gi...
217.0 [0..2] [292..198]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGIAAKKIA EAEDLVKQAE KSLKLSMLKW VPDYDSAADE YSKAATAYRI AKSYDKSKEC  60
   61 FLKAIDAYKN NKSWFHAAKA YEQIILLSKD ADKLHEVEEY ANKSASLYQQ HGSPEAAASA 120
  121 LDKAAKLTES KHPDMALRFY QHALEVIMIE DSVRQAAEYA SKVSRILVKL RRYDEATNAL 180
  181 KKEISLNQQT ESYGQIGRLV VALVMVQLAR GDSVEAEKTF REWGNCCEPE EVSTLQTLLQ 240
  241 AFDDEDPELA ARMLASPFIR HMDVEYAILS KNIPLPQGIQ MEKKAGDTAA ETNDAEDEGG 300
  301 LC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.221849
Match: 2ifuA
Description: No description for 2ifuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle