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View Structure Prediction Details

Protein: FBpp0308242, FBp...
Organism: Drosophila melanogaster
Length: 536 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308242, FBp....

Description E-value Query
Range
Subject
Range
gi|220945962 - gi|220945962|gb|ACL85524.1| Atf-2-PA [synthetic construct]
Atf-2-PA - The gene Activating transcription factor-2 is referred to in FlyBase by the symbol Dmel\Atf-2 (CG304...
486.0 [0..28] [536..342]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARLEITVS LALAATLLCS ILGHCEMSVY PGLRRRPIQP PVMDPQSEQE YAFLAQMMEQ  60
   61 YARRRLQQQF DQQLHEINLK MDRQRQLLEQ ERYRQRQQEL QVQREAEEDY ESNGNNLNQQ 120
  121 YDQYDNAEAE ASYGSPMEAV SD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQSPPLYLPR LPNLPPLPSL PNRPSLGNSP NRNSVLRERI PFAVGPSDAR FFDNPNDPSG  60
   61 ELDSRALEDY EEYAPIEPTT EVATTASKTK IDTPVPAPVP VEPPKLLDAA NTNFHRINPQ 120
  121 SAAAAAVAGV NIPQSKEQPP HELNALINKL QKQSKAPSHL TLVNGGDSSQ EQIVLRQHLG 180
  181 MNSE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [327-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVYIVALIA GVSAAVTVGL LALGVTWFHN RHKAAADVEY PAYGVTGPNK DVSPSGDRKL  60
   61 AQSAQMYHYQ HQKQQIIAME NQATDGSCGM SDVESDDDNE EGDYTVYECP GLAPTGEMEV 120
  121 KNPLFLDETP ATPSNNL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [464-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSQTAGAANA AAATNNNITQ ATPQQPATLK KGTVKPNINL LNATGTAAAA ASAASAASAT  60
   61 GGEEPKQKRK SKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle